Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN18Q99952 AC016694.1-201ENST00000434179 700 ntBASIC18.51■□□□□ 0.55
PTPN18Q99952 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
PTPN18Q99952 AC006033.1-201ENST00000440505 426 ntBASIC18.51■□□□□ 0.55
PTPN18Q99952 TARDBPP1-201ENST00000442013 1203 ntBASIC18.51■□□□□ 0.55
PTPN18Q99952 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN18Q99952 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN18Q99952 AC106760.1-201ENST00000508690 800 ntBASIC18.51■□□□□ 0.55
PTPN18Q99952 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN18Q99952 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN18Q99952 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN18Q99952 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 DUX4L45-201ENST00000566406 1057 ntBASIC18.51■□□□□ 0.55
PTPN18Q99952 AL118558.3-201ENST00000607414 1079 ntBASIC18.51■□□□□ 0.55
PTPN18Q99952 AC091271.1-201ENST00000611877 1162 ntBASIC18.51■□□□□ 0.55
PTPN18Q99952 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN18Q99952 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN18Q99952 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN18Q99952 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PTPN18Q99952 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN18Q99952 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
PTPN18Q99952 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN18Q99952 AL691432.1-201ENST00000596308 1422 ntBASIC18.5■□□□□ 0.55
PTPN18Q99952 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN18Q99952 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PTPN18Q99952 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 SOCS2P1-201ENST00000417727 557 ntBASIC18.5■□□□□ 0.55
PTPN18Q99952 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN18Q99952 EEF1DP4-201ENST00000446006 880 ntBASIC18.5■□□□□ 0.55
PTPN18Q99952 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PTPN18Q99952 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.5■□□□□ 0.55
PTPN18Q99952 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN18Q99952 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.5■□□□□ 0.55
PTPN18Q99952 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN18Q99952 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN18Q99952 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN18Q99952 AL365330.1-201ENST00000607459 531 ntBASIC18.5■□□□□ 0.55
PTPN18Q99952 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN18Q99952 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN18Q99952 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN18Q99952 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN18Q99952 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN18Q99952 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN18Q99952 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN18Q99952 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PTPN18Q99952 AC134312.5-201ENST00000568031 1313 ntBASIC18.49■□□□□ 0.55
PTPN18Q99952 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN18Q99952 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN18Q99952 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN18Q99952 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN18Q99952 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PTPN18Q99952 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PTPN18Q99952 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
PTPN18Q99952 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.49■□□□□ 0.55
PTPN18Q99952 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN18Q99952 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.49■□□□□ 0.55
PTPN18Q99952 KRT18P64-201ENST00000434946 1219 ntBASIC18.49■□□□□ 0.55
PTPN18Q99952 AC012441.1-201ENST00000446669 685 ntBASIC18.49■□□□□ 0.55
PTPN18Q99952 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
PTPN18Q99952 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.49■□□□□ 0.55
PTPN18Q99952 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN18Q99952 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.49■□□□□ 0.55
PTPN18Q99952 AL049840.4-201ENST00000602422 811 ntBASIC18.49■□□□□ 0.55
PTPN18Q99952 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
PTPN18Q99952 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 PCGF3-213ENST00000620529 1899 ntBASIC18.49■□□□□ 0.55
PTPN18Q99952 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN18Q99952 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
PTPN18Q99952 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN18Q99952 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN18Q99952 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN18Q99952 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN18Q99952 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PTPN18Q99952 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
PTPN18Q99952 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN18Q99952 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms