Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPENQ96T58 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPENQ96T58 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPENQ96T58 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPENQ96T58 AC006538.1-201ENST00000567905 1585 ntBASIC14.52□□□□□ -0.09
SPENQ96T58 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.52□□□□□ -0.09
SPENQ96T58 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
SPENQ96T58 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPENQ96T58 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.52□□□□□ -0.09
SPENQ96T58 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPENQ96T58 BRWD1P1-201ENST00000401091 371 ntBASIC14.52□□□□□ -0.09
SPENQ96T58 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.52□□□□□ -0.09
SPENQ96T58 GOLGA2P4-201ENST00000441462 777 ntBASIC14.52□□□□□ -0.09
SPENQ96T58 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.52□□□□□ -0.09
SPENQ96T58 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.52□□□□□ -0.09
SPENQ96T58 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.52□□□□□ -0.09
SPENQ96T58 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.51□□□□□ -0.09
SPENQ96T58 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.51□□□□□ -0.09
SPENQ96T58 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.51□□□□□ -0.09
SPENQ96T58 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.51□□□□□ -0.09
SPENQ96T58 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.51□□□□□ -0.09
SPENQ96T58 MIR3615-201ENST00000581999 87 ntBASIC14.51□□□□□ -0.09
SPENQ96T58 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SPENQ96T58 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
SPENQ96T58 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.51□□□□□ -0.09
SPENQ96T58 AL162726.2-201ENST00000438986 1017 ntBASIC14.51□□□□□ -0.09
SPENQ96T58 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.51□□□□□ -0.09
SPENQ96T58 AL139384.1-201ENST00000612143 3047 ntBASIC14.51□□□□□ -0.09
SPENQ96T58 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SPENQ96T58 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.51□□□□□ -0.09
SPENQ96T58 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.51□□□□□ -0.09
SPENQ96T58 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.51□□□□□ -0.09
SPENQ96T58 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
SPENQ96T58 AL442647.2-201ENST00000429864 857 ntBASIC14.51□□□□□ -0.09
SPENQ96T58 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.51□□□□□ -0.09
SPENQ96T58 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.51□□□□□ -0.09
SPENQ96T58 SERBP1P3-201ENST00000459980 809 ntBASIC14.51□□□□□ -0.09
SPENQ96T58 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SPENQ96T58 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.51□□□□□ -0.09
SPENQ96T58 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPENQ96T58 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.51□□□□□ -0.09
SPENQ96T58 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.51□□□□□ -0.09
SPENQ96T58 INTS4P2-202ENST00000614726 2019 ntBASIC14.5□□□□□ -0.09
SPENQ96T58 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
SPENQ96T58 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
SPENQ96T58 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.5□□□□□ -0.09
SPENQ96T58 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 AC244669.2-201ENST00000612320 853 ntBASIC14.5□□□□□ -0.09
SPENQ96T58 AC005695.3-201ENST00000614522 232 ntBASIC14.5□□□□□ -0.09
SPENQ96T58 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SPENQ96T58 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.5□□□□□ -0.09
SPENQ96T58 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.5□□□□□ -0.09
SPENQ96T58 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.5□□□□□ -0.09
SPENQ96T58 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 GPAA1P2-201ENST00000417923 928 ntBASIC14.5□□□□□ -0.09
SPENQ96T58 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.5□□□□□ -0.09
SPENQ96T58 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.5□□□□□ -0.09
SPENQ96T58 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.5□□□□□ -0.09
SPENQ96T58 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.5□□□□□ -0.09
SPENQ96T58 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.5□□□□□ -0.09
SPENQ96T58 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms