Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 AC138969.3-201ENST00000546612 1459 ntBASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 AC138932.2-201ENST00000548268 1459 ntBASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 AC126755.4-201ENST00000549796 1459 ntBASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 HILS1-202ENST00000545329 423 ntBASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 WFDC1-204ENST00000613603 549 ntBASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 PCDHA12-202ENST00000613593 2588 ntBASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 AC136604.1-201ENST00000418535 575 ntBASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP2Q96SN8 AD000864.1-201ENST00000624076 2295 ntBASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 AC074338.1-201ENST00000416825 156 ntBASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.97■□□□□ 0.63
CDK5RAP2Q96SN8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 AC063926.2-201ENST00000623766 1308 ntBASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 NKILA-202ENST00000614771 2598 ntBASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms