Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 AL022328.3-201ENST00000607943 679 ntBASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 CLK3P2-201ENST00000427566 1453 ntBASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 LTB4R2-202ENST00000528054 3092 ntBASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD1Q96PZ7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 CU634019.7-201ENST00000624153 1185 ntBASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 FP236241.2-201ENST00000624906 1185 ntBASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 AP001094.4-201ENST00000579008 2176 ntBASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.75□□□□□ -0.21
CSMD1Q96PZ7 AC008894.3-201ENST00000624324 3103 ntBASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 AC005077.2-201ENST00000449786 690 ntBASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 AL591846.1-201ENST00000451736 433 ntBASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 KRT90P-201ENST00000549264 1064 ntBASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 AL162726.2-201ENST00000438986 1017 ntBASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 IMP3P2-201ENST00000489760 475 ntBASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 GNRHR2-203ENST00000581100 1187 ntBASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 AC061975.2-201ENST00000581722 295 ntBASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms