Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX27Q96L92 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX27Q96L92 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SNX27Q96L92 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.62■□□□□ 0.41
SNX27Q96L92 RPS2P32-201ENST00000439199 892 ntBASIC17.62■□□□□ 0.41
SNX27Q96L92 MTND6P24-201ENST00000440466 518 ntBASIC17.62■□□□□ 0.41
SNX27Q96L92 GPR53P-205ENST00000457298 1084 ntBASIC17.62■□□□□ 0.41
SNX27Q96L92 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX27Q96L92 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SNX27Q96L92 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.62■□□□□ 0.41
SNX27Q96L92 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.62■□□□□ 0.41
SNX27Q96L92 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX27Q96L92 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX27Q96L92 AL133215.2-201ENST00000609242 977 ntBASIC17.62■□□□□ 0.41
SNX27Q96L92 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.62■□□□□ 0.41
SNX27Q96L92 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 AC005052.1-201ENST00000625181 2492 ntBASIC17.62■□□□□ 0.41
SNX27Q96L92 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SNX27Q96L92 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX27Q96L92 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX27Q96L92 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX27Q96L92 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX27Q96L92 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX27Q96L92 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX27Q96L92 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SNX27Q96L92 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX27Q96L92 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.61■□□□□ 0.41
SNX27Q96L92 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.61■□□□□ 0.41
SNX27Q96L92 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.61■□□□□ 0.41
SNX27Q96L92 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX27Q96L92 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX27Q96L92 AL391005.1-201ENST00000623953 2435 ntBASIC17.61■□□□□ 0.41
SNX27Q96L92 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.61■□□□□ 0.41
SNX27Q96L92 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SNX27Q96L92 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX27Q96L92 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SNX27Q96L92 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX27Q96L92 ME2P1-201ENST00000426028 1970 ntBASIC17.6■□□□□ 0.41
SNX27Q96L92 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNX27Q96L92 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNX27Q96L92 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 PCDHA12-202ENST00000613593 2588 ntBASIC17.6■□□□□ 0.41
SNX27Q96L92 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.6■□□□□ 0.41
SNX27Q96L92 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.6■□□□□ 0.41
SNX27Q96L92 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SNX27Q96L92 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.6■□□□□ 0.41
SNX27Q96L92 AC027369.6-201ENST00000525520 931 ntBASIC17.6■□□□□ 0.41
SNX27Q96L92 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.6■□□□□ 0.41
SNX27Q96L92 AL365330.1-201ENST00000607459 531 ntBASIC17.6■□□□□ 0.41
SNX27Q96L92 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 AC100757.3-201ENST00000622361 1406 ntBASIC17.6■□□□□ 0.41
SNX27Q96L92 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.6■□□□□ 0.41
SNX27Q96L92 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SNX27Q96L92 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX27Q96L92 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms