Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTP4Q96DX8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTP4Q96DX8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 HAUS4P1-201ENST00000406739 1145 ntBASIC16.68■□□□□ 0.26
RTP4Q96DX8 AC023274.1-201ENST00000418278 595 ntBASIC16.68■□□□□ 0.26
RTP4Q96DX8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTP4Q96DX8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTP4Q96DX8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 WASH6P-202ENST00000359512 1437 ntBASIC16.68■□□□□ 0.26
RTP4Q96DX8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTP4Q96DX8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTP4Q96DX8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTP4Q96DX8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.68■□□□□ 0.26
RTP4Q96DX8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.67■□□□□ 0.26
RTP4Q96DX8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 AC018845.2-201ENST00000568326 409 ntBASIC16.67■□□□□ 0.26
RTP4Q96DX8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTP4Q96DX8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.67■□□□□ 0.26
RTP4Q96DX8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 PDPK2P-202ENST00000562415 1191 ntBASIC16.66■□□□□ 0.26
RTP4Q96DX8 MIR4321-201ENST00000592276 80 ntBASIC16.66■□□□□ 0.26
RTP4Q96DX8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 AL161645.1-201ENST00000622716 1255 ntBASIC16.66■□□□□ 0.26
RTP4Q96DX8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTP4Q96DX8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.66■□□□□ 0.26
RTP4Q96DX8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms