Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 SNORA78-201ENST00000459373 127 ntBASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 AC020765.3-201ENST00000613051 740 ntBASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 AL590787.1-201ENST00000568856 1315 ntBASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 AC007191.1-201ENST00000623179 2995 ntBASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SMIM4Q8WVI0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 LINC00528-201ENST00000600723 2160 ntBASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 TSPY15P-201ENST00000457163 923 ntBASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 AC091167.2-201ENST00000579581 588 ntBASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms