Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAF3IP1Q8TDR0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP1Q8TDR0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP1Q8TDR0 HLA-A-201ENST00000376802 1334 ntBASIC17.14■□□□□ 0.33
TRAF3IP1Q8TDR0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP1Q8TDR0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP1Q8TDR0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRAF3IP1Q8TDR0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAF3IP1Q8TDR0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAF3IP1Q8TDR0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRAF3IP1Q8TDR0 AC007326.2-201ENST00000624224 7579 ntBASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 AL596087.1-201ENST00000400979 1969 ntBASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 HCG4B-203ENST00000450128 991 ntBASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 AC079776.4-201ENST00000511039 504 ntBASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 AC096734.2-201ENST00000562054 433 ntBASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 AC010507.1-201ENST00000633895 436 ntBASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 AC007064.4-201ENST00000637740 555 ntBASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP1Q8TDR0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 PMS2P4-201ENST00000412466 1052 ntBASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 MIR3909-201ENST00000579518 119 ntBASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAF3IP1Q8TDR0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms