Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PRKAG2-201ENST00000287878 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 AFG3L1P-214ENST00000454997 3327 ntTSL 2 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 AL928654.5-201ENST00000624831 2501 ntBASIC10.07□□□□□ -0.8
SVIPQ8NHG7 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 UTP11-201ENST00000373014 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 C11orf1-201ENST00000260276 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 RSU1-201ENST00000345264 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 CYB5B-204ENST00000515314 1658 ntTSL 5 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 NPY2R-201ENST00000329476 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 AC093525.10-201ENST00000625130 1569 ntBASIC10.06□□□□□ -0.8
SVIPQ8NHG7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 CSTF3-AS1-201ENST00000500025 2031 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 EIF4B-203ENST00000420463 1936 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 LRRC4C-201ENST00000278198 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 NIP7-201ENST00000254940 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 HK1-201ENST00000298649 3596 ntTSL 5 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 FUT6-203ENST00000524754 2598 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 TMEFF2-202ENST00000392314 2842 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 LAMP5-201ENST00000246070 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SVIPQ8NHG7 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 PSMD2-206ENST00000439383 2633 ntTSL 2 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 ANAPC16-205ENST00000621663 3567 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.05□□□□□ -0.8
SVIPQ8NHG7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms