Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 AC068418.2-201ENST00000577309 3703 ntBASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRFBP1Q8NEF9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 AC006449.5-201ENST00000610658 2098 ntBASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 YBX2P1-201ENST00000394192 760 ntBASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRFBP1Q8NEF9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 TFAMP1-201ENST00000412727 736 ntBASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 AL355306.1-201ENST00000415580 579 ntBASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 AP000347.1-202ENST00000435868 847 ntBASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 AC093724.1-201ENST00000448659 1027 ntBASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 MIR3687-2-201ENST00000577708 61 ntBASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 MIR3687-1-201ENST00000614492 61 ntBASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 AC092902.6-201ENST00000641783 218 ntBASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRFBP1Q8NEF9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms