Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 AL355306.1-201ENST00000415580 579 ntBASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 AP000347.1-202ENST00000435868 847 ntBASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 FAM86C2P-203ENST00000528684 1004 ntBASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 MTDHP5-201ENST00000598980 586 ntBASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 C20orf181-201ENST00000623918 480 ntBASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM35BQ8NCS4 PCDHA1-201ENST00000378133 2726 ntBASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35BQ8NCS4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM35BQ8NCS4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms