Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 AC006277.1-201ENST00000624348 1610 ntBASIC17.65■□□□□ 0.42
HERC6Q8IVU3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 AC008735.3-201ENST00000596646 500 ntBASIC17.65■□□□□ 0.42
HERC6Q8IVU3 AC013467.2-201ENST00000605472 835 ntBASIC17.65■□□□□ 0.42
HERC6Q8IVU3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 TUBB8P12-201ENST00000308911 1335 ntBASIC17.65■□□□□ 0.42
HERC6Q8IVU3 TUBB7P-202ENST00000428444 1305 ntBASIC17.65■□□□□ 0.42
HERC6Q8IVU3 TUBB8P7-204ENST00000567960 1332 ntBASIC17.65■□□□□ 0.42
HERC6Q8IVU3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERC6Q8IVU3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.64■□□□□ 0.42
HERC6Q8IVU3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HERC6Q8IVU3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 AL645608.8-201ENST00000606034 2086 ntBASIC17.64■□□□□ 0.41
HERC6Q8IVU3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 MIR6069-201ENST00000620069 79 ntBASIC17.64■□□□□ 0.41
HERC6Q8IVU3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERC6Q8IVU3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 BOLA2P3-201ENST00000404566 256 ntBASIC17.63■□□□□ 0.41
HERC6Q8IVU3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 BNIP3P42-201ENST00000454982 569 ntBASIC17.63■□□□□ 0.41
HERC6Q8IVU3 CROCCP4-201ENST00000457096 498 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms