Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SNRPFP62306 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
SNRPFP62306 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SNRPFP62306 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNRPFP62306 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SNRPFP62306 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SNRPFP62306 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.75■□□□□ 0.43
SNRPFP62306 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SNRPFP62306 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SNRPFP62306 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SNRPFP62306 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 KRT18P32-201ENST00000424695 1287 ntBASIC17.75■□□□□ 0.43
SNRPFP62306 AC004967.1-201ENST00000453589 447 ntBASIC17.75■□□□□ 0.43
SNRPFP62306 RNA5SP410-201ENST00000516285 106 ntBASIC17.75■□□□□ 0.43
SNRPFP62306 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.75■□□□□ 0.43
SNRPFP62306 RARRES2P9-201ENST00000565168 469 ntBASIC17.75■□□□□ 0.43
SNRPFP62306 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.75■□□□□ 0.43
SNRPFP62306 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.75■□□□□ 0.43
SNRPFP62306 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.75■□□□□ 0.43
SNRPFP62306 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.75■□□□□ 0.43
SNRPFP62306 AC023511.2-201ENST00000618803 211 ntBASIC17.75■□□□□ 0.43
SNRPFP62306 AC009093.7-201ENST00000623853 1223 ntBASIC17.75■□□□□ 0.43
SNRPFP62306 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SNRPFP62306 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 AL603832.2-201ENST00000566195 2125 ntBASIC17.75■□□□□ 0.43
SNRPFP62306 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.75■□□□□ 0.43
SNRPFP62306 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.75■□□□□ 0.43
SNRPFP62306 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SNRPFP62306 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNRPFP62306 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SNRPFP62306 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.74■□□□□ 0.43
SNRPFP62306 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.74■□□□□ 0.43
SNRPFP62306 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.74■□□□□ 0.43
SNRPFP62306 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SNRPFP62306 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SNRPFP62306 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.74■□□□□ 0.43
SNRPFP62306 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.74■□□□□ 0.43
SNRPFP62306 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.74■□□□□ 0.43
SNRPFP62306 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SNRPFP62306 AC134684.3-201ENST00000641758 218 ntBASIC17.74■□□□□ 0.43
SNRPFP62306 AC079781.4-201ENST00000641908 219 ntBASIC17.74■□□□□ 0.43
SNRPFP62306 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SNRPFP62306 AC069224.1-201ENST00000566372 1715 ntBASIC17.74■□□□□ 0.43
SNRPFP62306 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SNRPFP62306 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SNRPFP62306 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.74■□□□□ 0.43
SNRPFP62306 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.74■□□□□ 0.43
SNRPFP62306 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPFP62306 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
SNRPFP62306 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SNRPFP62306 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.73■□□□□ 0.43
SNRPFP62306 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.73■□□□□ 0.43
SNRPFP62306 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
SNRPFP62306 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.73■□□□□ 0.43
SNRPFP62306 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPFP62306 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms