Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.46■□□□□ 0.23
AP1S1P61966 AC006449.6-201ENST00000612330 2296 ntBASIC16.46■□□□□ 0.23
AP1S1P61966 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.46■□□□□ 0.23
AP1S1P61966 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.46■□□□□ 0.23
AP1S1P61966 CNN2P2-201ENST00000443536 909 ntBASIC16.46■□□□□ 0.23
AP1S1P61966 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.46■□□□□ 0.23
AP1S1P61966 CNN2P3-201ENST00000450201 906 ntBASIC16.46■□□□□ 0.23
AP1S1P61966 AC245100.5-201ENST00000452108 331 ntBASIC16.46■□□□□ 0.23
AP1S1P61966 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.46■□□□□ 0.23
AP1S1P61966 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.46■□□□□ 0.23
AP1S1P61966 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S1P61966 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.46■□□□□ 0.23
AP1S1P61966 MIR6080-201ENST00000617359 66 ntBASIC16.46■□□□□ 0.23
AP1S1P61966 AL136317.3-201ENST00000618497 906 ntBASIC16.46■□□□□ 0.23
AP1S1P61966 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.46■□□□□ 0.23
AP1S1P61966 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S1P61966 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP1S1P61966 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S1P61966 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
AP1S1P61966 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S1P61966 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S1P61966 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S1P61966 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
AP1S1P61966 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.46■□□□□ 0.23
AP1S1P61966 MTHFR-217ENST00000641820 1569 ntBASIC16.46■□□□□ 0.23
AP1S1P61966 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S1P61966 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP1S1P61966 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.46■□□□□ 0.23
AP1S1P61966 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
AP1S1P61966 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S1P61966 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
AP1S1P61966 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
AP1S1P61966 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
AP1S1P61966 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
AP1S1P61966 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.46■□□□□ 0.22
AP1S1P61966 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.45■□□□□ 0.22
AP1S1P61966 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.45■□□□□ 0.22
AP1S1P61966 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.45■□□□□ 0.22
AP1S1P61966 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
AP1S1P61966 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 AL118508.1-201ENST00000613502 2345 ntBASIC16.45■□□□□ 0.22
AP1S1P61966 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 AL353705.2-201ENST00000428243 662 ntBASIC16.45■□□□□ 0.22
AP1S1P61966 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.45■□□□□ 0.22
AP1S1P61966 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.45■□□□□ 0.22
AP1S1P61966 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.45■□□□□ 0.22
AP1S1P61966 AC069262.1-201ENST00000539058 672 ntBASIC16.45■□□□□ 0.22
AP1S1P61966 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 AC015911.4-201ENST00000588022 1070 ntBASIC16.45■□□□□ 0.22
AP1S1P61966 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
AP1S1P61966 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 AC093028.1-201ENST00000622998 982 ntBASIC16.45■□□□□ 0.22
AP1S1P61966 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.45■□□□□ 0.22
AP1S1P61966 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.45■□□□□ 0.22
AP1S1P61966 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.45■□□□□ 0.22
AP1S1P61966 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
AP1S1P61966 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S1P61966 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S1P61966 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S1P61966 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S1P61966 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.44■□□□□ 0.22
AP1S1P61966 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S1P61966 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S1P61966 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S1P61966 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
AP1S1P61966 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.44■□□□□ 0.22
AP1S1P61966 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
AP1S1P61966 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.44■□□□□ 0.22
AP1S1P61966 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.44■□□□□ 0.22
AP1S1P61966 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.44■□□□□ 0.22
AP1S1P61966 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.44■□□□□ 0.22
AP1S1P61966 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.44■□□□□ 0.22
AP1S1P61966 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.44■□□□□ 0.22
AP1S1P61966 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S1P61966 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms