Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
CLDN20P56880 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 AL391256.1-201ENST00000443260 1855 ntBASIC15.08■□□□□ 0
CLDN20P56880 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.07■□□□□ 0
CLDN20P56880 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.07■□□□□ 0
CLDN20P56880 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.07■□□□□ 0
CLDN20P56880 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLDN20P56880 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.07■□□□□ 0
CLDN20P56880 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.07■□□□□ 0
CLDN20P56880 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
CLDN20P56880 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 RNU1-129P-201ENST00000384064 167 ntBASIC15.07■□□□□ 0
CLDN20P56880 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLDN20P56880 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.07■□□□□ 0
CLDN20P56880 CEND1P1-201ENST00000451006 455 ntBASIC15.07■□□□□ 0
CLDN20P56880 YBX1P5-201ENST00000509441 847 ntBASIC15.07■□□□□ 0
CLDN20P56880 AC112191.1-201ENST00000523689 701 ntBASIC15.07■□□□□ 0
CLDN20P56880 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.07■□□□□ 0
CLDN20P56880 U1.21-201ENST00000580816 167 ntBASIC15.07■□□□□ 0
CLDN20P56880 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.07■□□□□ 0
CLDN20P56880 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.07■□□□□ 0
CLDN20P56880 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.07■□□□□ 0
CLDN20P56880 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.07■□□□□ 0
CLDN20P56880 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLDN20P56880 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 ELL2P1-201ENST00000413990 1906 ntBASIC15.07■□□□□ 0
CLDN20P56880 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.07■□□□□ 0
CLDN20P56880 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLDN20P56880 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN20P56880 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.07■□□□□ 0
CLDN20P56880 AC126177.1-201ENST00000547829 2218 ntBASIC15.07■□□□□ 0
CLDN20P56880 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CLDN20P56880 LINC00895-201ENST00000629028 1637 ntBASIC15.06■□□□□ 0
CLDN20P56880 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 LINC02228-204ENST00000642115 2962 ntBASIC15.06■□□□□ 0
CLDN20P56880 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.06■□□□□ 0
CLDN20P56880 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CLDN20P56880 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CLDN20P56880 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CLDN20P56880 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CLDN20P56880 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.06■□□□□ 0
CLDN20P56880 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CLDN20P56880 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.06■□□□□ 0
CLDN20P56880 AC002056.1-201ENST00000395613 760 ntBASIC15.06■□□□□ 0
CLDN20P56880 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.06■□□□□ 0
CLDN20P56880 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.06■□□□□ 0
CLDN20P56880 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.06■□□□□ 0
CLDN20P56880 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CLDN20P56880 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.06■□□□□ 0
CLDN20P56880 AL009183.1-201ENST00000603760 355 ntBASIC15.06■□□□□ 0
CLDN20P56880 AC013467.2-201ENST00000605472 835 ntBASIC15.06■□□□□ 0
CLDN20P56880 AL691403.2-201ENST00000618460 490 ntBASIC15.06■□□□□ 0
CLDN20P56880 AC134684.3-201ENST00000641758 218 ntBASIC15.06■□□□□ 0
CLDN20P56880 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.06■□□□□ 0
CLDN20P56880 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.06■□□□□ 0
CLDN20P56880 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms