Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 GPAA1P2-202ENST00000606848 1787 ntBASIC15.34■□□□□ 0.05
CDH12P55289 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CDH12P55289 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
CDH12P55289 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH12P55289 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH12P55289 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.33■□□□□ 0.05
CDH12P55289 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.33■□□□□ 0.05
CDH12P55289 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CDH12P55289 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH12P55289 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH12P55289 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH12P55289 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDH12P55289 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
CDH12P55289 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CDH12P55289 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.33■□□□□ 0.05
CDH12P55289 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH12P55289 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH12P55289 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDH12P55289 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH12P55289 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH12P55289 POU5F1P6-201ENST00000466990 990 ntBASIC15.33■□□□□ 0.04
CDH12P55289 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH12P55289 UNC93B7-201ENST00000509439 705 ntBASIC15.33■□□□□ 0.04
CDH12P55289 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDH12P55289 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 AC131009.4-201ENST00000624048 1740 ntBASIC15.33■□□□□ 0.04
CDH12P55289 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH12P55289 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH12P55289 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH12P55289 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH12P55289 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDH12P55289 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDH12P55289 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH12P55289 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH12P55289 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CDH12P55289 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CDH12P55289 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH12P55289 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.33■□□□□ 0.04
CDH12P55289 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH12P55289 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH12P55289 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH12P55289 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDH12P55289 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH12P55289 AC126177.1-201ENST00000547829 2218 ntBASIC15.32■□□□□ 0.04
CDH12P55289 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH12P55289 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 LINC01144-201ENST00000626198 1710 ntBASIC15.32■□□□□ 0.04
CDH12P55289 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH12P55289 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH12P55289 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CDH12P55289 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CDH12P55289 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDH12P55289 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH12P55289 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH12P55289 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 RPS2P1-201ENST00000434010 821 ntBASIC15.32■□□□□ 0.04
CDH12P55289 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 RPS15P9-201ENST00000494093 319 ntBASIC15.32■□□□□ 0.04
CDH12P55289 KRT18P56-201ENST00000507275 550 ntBASIC15.32■□□□□ 0.04
CDH12P55289 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.32■□□□□ 0.04
CDH12P55289 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH12P55289 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH12P55289 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH12P55289 AP005117.1-202ENST00000581724 1908 ntBASIC15.32■□□□□ 0.04
CDH12P55289 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDH12P55289 AP002414.2-201ENST00000591780 3365 ntBASIC15.32■□□□□ 0.04
CDH12P55289 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH12P55289 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH12P55289 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH12P55289 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDH12P55289 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH12P55289 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms