Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
USP11P51784 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.46■□□□□ 0.55
USP11P51784 AL353705.2-201ENST00000428243 662 ntBASIC18.46■□□□□ 0.55
USP11P51784 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.46■□□□□ 0.55
USP11P51784 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 AC067863.1-201ENST00000494933 530 ntBASIC18.46■□□□□ 0.55
USP11P51784 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.46■□□□□ 0.55
USP11P51784 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.46■□□□□ 0.55
USP11P51784 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.46■□□□□ 0.55
USP11P51784 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.46■□□□□ 0.55
USP11P51784 MIR6080-201ENST00000617359 66 ntBASIC18.46■□□□□ 0.55
USP11P51784 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.46■□□□□ 0.55
USP11P51784 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 AC006449.5-201ENST00000610658 2098 ntBASIC18.46■□□□□ 0.55
USP11P51784 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 TUBB3P1-201ENST00000405796 1332 ntBASIC18.46■□□□□ 0.55
USP11P51784 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
USP11P51784 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
USP11P51784 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.46■□□□□ 0.54
USP11P51784 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.45■□□□□ 0.54
USP11P51784 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.45■□□□□ 0.54
USP11P51784 AC018695.7-201ENST00000624587 2492 ntBASIC18.45■□□□□ 0.54
USP11P51784 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.45■□□□□ 0.54
USP11P51784 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
USP11P51784 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
USP11P51784 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.45■□□□□ 0.54
USP11P51784 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.45■□□□□ 0.54
USP11P51784 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.45■□□□□ 0.54
USP11P51784 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.45■□□□□ 0.54
USP11P51784 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.45■□□□□ 0.54
USP11P51784 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.45■□□□□ 0.54
USP11P51784 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.45■□□□□ 0.54
USP11P51784 AC051619.7-201ENST00000568314 623 ntBASIC18.45■□□□□ 0.54
USP11P51784 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.45■□□□□ 0.54
USP11P51784 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
USP11P51784 AC003101.2-201ENST00000612557 442 ntBASIC18.45■□□□□ 0.54
USP11P51784 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.45■□□□□ 0.54
USP11P51784 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.45■□□□□ 0.54
USP11P51784 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.45■□□□□ 0.54
USP11P51784 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.45■□□□□ 0.54
USP11P51784 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
USP11P51784 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 AC092364.2-201ENST00000596710 2692 ntBASIC18.45■□□□□ 0.54
USP11P51784 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP11P51784 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.44■□□□□ 0.54
USP11P51784 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.44■□□□□ 0.54
USP11P51784 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.44■□□□□ 0.54
USP11P51784 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 AL035456.1-201ENST00000456064 1369 ntBASIC18.44■□□□□ 0.54
USP11P51784 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.44■□□□□ 0.54
USP11P51784 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.44■□□□□ 0.54
USP11P51784 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.44■□□□□ 0.54
USP11P51784 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.44■□□□□ 0.54
USP11P51784 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.44■□□□□ 0.54
USP11P51784 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.44■□□□□ 0.54
USP11P51784 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.44■□□□□ 0.54
USP11P51784 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.44■□□□□ 0.54
USP11P51784 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
USP11P51784 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
USP11P51784 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
USP11P51784 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.44■□□□□ 0.54
USP11P51784 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
USP11P51784 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
USP11P51784 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP11P51784 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms