Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE6CP51160 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.75■□□□□ 0.43
PDE6CP51160 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.75■□□□□ 0.43
PDE6CP51160 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.75■□□□□ 0.43
PDE6CP51160 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE6CP51160 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.75■□□□□ 0.43
PDE6CP51160 AL596442.2-201ENST00000610240 980 ntBASIC17.75■□□□□ 0.43
PDE6CP51160 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
PDE6CP51160 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.75■□□□□ 0.43
PDE6CP51160 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 LINC01144-201ENST00000626198 1710 ntBASIC17.75■□□□□ 0.43
PDE6CP51160 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE6CP51160 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6CP51160 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE6CP51160 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6CP51160 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDE6CP51160 AC026691.1-201ENST00000602502 2017 ntBASIC17.74■□□□□ 0.43
PDE6CP51160 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE6CP51160 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE6CP51160 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PDE6CP51160 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDE6CP51160 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6CP51160 RNU1-129P-201ENST00000384064 167 ntBASIC17.74■□□□□ 0.43
PDE6CP51160 AC002056.1-201ENST00000395613 760 ntBASIC17.74■□□□□ 0.43
PDE6CP51160 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.74■□□□□ 0.43
PDE6CP51160 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.74■□□□□ 0.43
PDE6CP51160 PMS2P2-201ENST00000425039 1128 ntBASIC17.74■□□□□ 0.43
PDE6CP51160 CNN2P11-201ENST00000429351 262 ntBASIC17.74■□□□□ 0.43
PDE6CP51160 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6CP51160 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.74■□□□□ 0.43
PDE6CP51160 AP000344.2-201ENST00000512987 629 ntBASIC17.74■□□□□ 0.43
PDE6CP51160 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.74■□□□□ 0.43
PDE6CP51160 AL031432.2-201ENST00000566714 459 ntBASIC17.74■□□□□ 0.43
PDE6CP51160 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PDE6CP51160 AL928711.1-201ENST00000570165 459 ntBASIC17.74■□□□□ 0.43
PDE6CP51160 U1.21-201ENST00000580816 167 ntBASIC17.74■□□□□ 0.43
PDE6CP51160 AC020765.3-201ENST00000613051 740 ntBASIC17.74■□□□□ 0.43
PDE6CP51160 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE6CP51160 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDE6CP51160 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6CP51160 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6CP51160 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6CP51160 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDE6CP51160 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PDE6CP51160 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6CP51160 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDE6CP51160 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6CP51160 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.74■□□□□ 0.43
PDE6CP51160 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6CP51160 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE6CP51160 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.73■□□□□ 0.43
PDE6CP51160 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6CP51160 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6CP51160 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6CP51160 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PDE6CP51160 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6CP51160 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE6CP51160 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PDE6CP51160 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6CP51160 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.73■□□□□ 0.43
PDE6CP51160 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE6CP51160 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6CP51160 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6CP51160 AL513523.2-202ENST00000427283 2040 ntBASIC17.73■□□□□ 0.43
PDE6CP51160 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6CP51160 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6CP51160 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PDE6CP51160 HMGA1P7-201ENST00000406908 502 ntBASIC17.73■□□□□ 0.43
PDE6CP51160 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.73■□□□□ 0.43
PDE6CP51160 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms