Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PSEN1P49768 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.54■□□□□ 0.4
PSEN1P49768 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PSEN1P49768 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.54■□□□□ 0.4
PSEN1P49768 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.54■□□□□ 0.4
PSEN1P49768 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PSEN1P49768 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
PSEN1P49768 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.53■□□□□ 0.4
PSEN1P49768 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 PRAL-201ENST00000624952 3286 ntBASIC17.53■□□□□ 0.4
PSEN1P49768 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.53■□□□□ 0.4
PSEN1P49768 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PSEN1P49768 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.53■□□□□ 0.4
PSEN1P49768 AC092474.2-201ENST00000424288 719 ntBASIC17.53■□□□□ 0.4
PSEN1P49768 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC17.53■□□□□ 0.4
PSEN1P49768 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.53■□□□□ 0.4
PSEN1P49768 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC17.53■□□□□ 0.4
PSEN1P49768 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 AP000344.2-201ENST00000512987 629 ntBASIC17.53■□□□□ 0.4
PSEN1P49768 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.53■□□□□ 0.4
PSEN1P49768 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PSEN1P49768 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.53■□□□□ 0.4
PSEN1P49768 AP001160.2-201ENST00000596071 487 ntBASIC17.53■□□□□ 0.4
PSEN1P49768 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PSEN1P49768 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.53■□□□□ 0.4
PSEN1P49768 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.53■□□□□ 0.4
PSEN1P49768 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.53■□□□□ 0.4
PSEN1P49768 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.53■□□□□ 0.4
PSEN1P49768 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PSEN1P49768 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.53■□□□□ 0.4
PSEN1P49768 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PSEN1P49768 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.52■□□□□ 0.4
PSEN1P49768 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 AKAP8P1-201ENST00000434743 1349 ntBASIC17.52■□□□□ 0.4
PSEN1P49768 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.52■□□□□ 0.4
PSEN1P49768 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.52■□□□□ 0.4
PSEN1P49768 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
PSEN1P49768 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.52■□□□□ 0.4
PSEN1P49768 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PSEN1P49768 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
PSEN1P49768 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.52■□□□□ 0.4
PSEN1P49768 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC17.52■□□□□ 0.4
PSEN1P49768 DNAJB3-202ENST00000449667 1266 ntBASIC17.52■□□□□ 0.4
PSEN1P49768 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.52■□□□□ 0.4
PSEN1P49768 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.52■□□□□ 0.4
PSEN1P49768 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.52■□□□□ 0.4
PSEN1P49768 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC17.52■□□□□ 0.4
PSEN1P49768 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC17.52■□□□□ 0.4
PSEN1P49768 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PSEN1P49768 SNHG9-202ENST00000564014 471 ntBASIC17.52■□□□□ 0.4
PSEN1P49768 RARRES2P8-201ENST00000566335 367 ntBASIC17.52■□□□□ 0.4
PSEN1P49768 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.52■□□□□ 0.4
PSEN1P49768 AC099522.2-201ENST00000607001 744 ntBASIC17.52■□□□□ 0.4
PSEN1P49768 AC021097.1-201ENST00000607902 574 ntBASIC17.52■□□□□ 0.4
PSEN1P49768 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.52■□□□□ 0.4
PSEN1P49768 AL139011.1-202ENST00000642063 584 ntBASIC17.52■□□□□ 0.4
PSEN1P49768 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 PKD1P1-201ENST00000458669 6805 ntBASIC17.52■□□□□ 0.4
PSEN1P49768 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PSEN1P49768 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.52■□□□□ 0.4
PSEN1P49768 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PSEN1P49768 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PSEN1P49768 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PSEN1P49768 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PSEN1P49768 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.52■□□□□ 0.39
PSEN1P49768 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.52■□□□□ 0.39
PSEN1P49768 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.52■□□□□ 0.39
PSEN1P49768 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms