Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TNFSF9P41273 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 TREML5P-201ENST00000421694 576 ntBASIC17.67■□□□□ 0.42
TNFSF9P41273 AC107890.1-201ENST00000422478 521 ntBASIC17.67■□□□□ 0.42
TNFSF9P41273 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFSF9P41273 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.67■□□□□ 0.42
TNFSF9P41273 AC067863.1-201ENST00000494933 530 ntBASIC17.67■□□□□ 0.42
TNFSF9P41273 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.67■□□□□ 0.42
TNFSF9P41273 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.67■□□□□ 0.42
TNFSF9P41273 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFSF9P41273 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.67■□□□□ 0.42
TNFSF9P41273 AC005498.2-205ENST00000593218 784 ntBASIC17.67■□□□□ 0.42
TNFSF9P41273 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFSF9P41273 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFSF9P41273 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF9P41273 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TNFSF9P41273 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFSF9P41273 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 FO538757.1-201ENST00000623083 1397 ntBASIC17.66■□□□□ 0.42
TNFSF9P41273 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
TNFSF9P41273 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFSF9P41273 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFSF9P41273 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TNFSF9P41273 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.66■□□□□ 0.42
TNFSF9P41273 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.66■□□□□ 0.42
TNFSF9P41273 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFSF9P41273 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFSF9P41273 HMGN1P19-201ENST00000436976 333 ntBASIC17.66■□□□□ 0.42
TNFSF9P41273 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFSF9P41273 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.66■□□□□ 0.42
TNFSF9P41273 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 AC105021.1-202ENST00000570572 669 ntBASIC17.66■□□□□ 0.42
TNFSF9P41273 AC024267.1-201ENST00000582320 895 ntBASIC17.66■□□□□ 0.42
TNFSF9P41273 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.66■□□□□ 0.42
TNFSF9P41273 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFSF9P41273 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TNFSF9P41273 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFSF9P41273 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFSF9P41273 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TNFSF9P41273 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TNFSF9P41273 PCDHB19P-201ENST00000570871 2371 ntBASIC17.66■□□□□ 0.42
TNFSF9P41273 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFSF9P41273 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF9P41273 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFSF9P41273 AL118508.1-201ENST00000613502 2345 ntBASIC17.65■□□□□ 0.42
TNFSF9P41273 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFSF9P41273 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFSF9P41273 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
TNFSF9P41273 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 MIR943-201ENST00000401286 94 ntBASIC17.65■□□□□ 0.42
TNFSF9P41273 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFSF9P41273 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFSF9P41273 AL353705.2-201ENST00000428243 662 ntBASIC17.65■□□□□ 0.42
TNFSF9P41273 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF9P41273 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TNFSF9P41273 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF9P41273 AC140878.1-201ENST00000565277 250 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms