Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.39■□□□□ 0.85
RFC4P35249 AC020907.1-201ENST00000616460 1350 ntBASIC20.39■□□□□ 0.85
RFC4P35249 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.39■□□□□ 0.85
RFC4P35249 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC4P35249 HAUS4P1-201ENST00000406739 1145 ntBASIC20.39■□□□□ 0.85
RFC4P35249 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.39■□□□□ 0.85
RFC4P35249 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RFC4P35249 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.39■□□□□ 0.85
RFC4P35249 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.39■□□□□ 0.85
RFC4P35249 RNA5SP412-201ENST00000516234 123 ntBASIC20.39■□□□□ 0.85
RFC4P35249 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RFC4P35249 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.39■□□□□ 0.85
RFC4P35249 AL365330.1-201ENST00000607459 531 ntBASIC20.39■□□□□ 0.85
RFC4P35249 AC068587.10-201ENST00000641210 219 ntBASIC20.39■□□□□ 0.85
RFC4P35249 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC4P35249 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.39■□□□□ 0.85
RFC4P35249 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RFC4P35249 U82695.1-201ENST00000635752 1889 ntBASIC20.39■□□□□ 0.85
RFC4P35249 AC005622.1-201ENST00000636801 1703 ntBASIC20.39■□□□□ 0.85
RFC4P35249 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.38■□□□□ 0.85
RFC4P35249 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.38■□□□□ 0.85
RFC4P35249 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20.38■□□□□ 0.85
RFC4P35249 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.38■□□□□ 0.85
RFC4P35249 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.38■□□□□ 0.85
RFC4P35249 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.38■□□□□ 0.85
RFC4P35249 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.38■□□□□ 0.85
RFC4P35249 BCRP2-202ENST00000447763 634 ntBASIC20.38■□□□□ 0.85
RFC4P35249 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.38■□□□□ 0.85
RFC4P35249 BCRP6-201ENST00000510112 632 ntBASIC20.38■□□□□ 0.85
RFC4P35249 BCRP7-201ENST00000511549 544 ntBASIC20.38■□□□□ 0.85
RFC4P35249 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.38■□□□□ 0.85
RFC4P35249 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RFC4P35249 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.38■□□□□ 0.85
RFC4P35249 AL158212.4-201ENST00000624062 1286 ntBASIC20.38■□□□□ 0.85
RFC4P35249 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RFC4P35249 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RFC4P35249 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RFC4P35249 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.38■□□□□ 0.85
RFC4P35249 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.38■□□□□ 0.85
RFC4P35249 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.38■□□□□ 0.85
RFC4P35249 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RFC4P35249 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RFC4P35249 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RFC4P35249 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RFC4P35249 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.37■□□□□ 0.85
RFC4P35249 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RFC4P35249 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.37■□□□□ 0.85
RFC4P35249 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RFC4P35249 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.37■□□□□ 0.85
RFC4P35249 FAM21FP-201ENST00000426241 1131 ntBASIC20.37■□□□□ 0.85
RFC4P35249 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.37■□□□□ 0.85
RFC4P35249 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.37■□□□□ 0.85
RFC4P35249 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.37■□□□□ 0.85
RFC4P35249 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.37■□□□□ 0.85
RFC4P35249 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.37■□□□□ 0.85
RFC4P35249 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.37■□□□□ 0.85
RFC4P35249 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.37■□□□□ 0.85
RFC4P35249 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.37■□□□□ 0.85
RFC4P35249 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
RFC4P35249 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RFC4P35249 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.36■□□□□ 0.85
RFC4P35249 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RFC4P35249 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.36■□□□□ 0.85
RFC4P35249 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms