Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC13P31276 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC13P31276 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC13P31276 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXC13P31276 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC13P31276 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC13P31276 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC13P31276 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC13P31276 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.89■□□□□ 0.29
HOXC13P31276 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXC13P31276 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC13P31276 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXC13P31276 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HOXC13P31276 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.89■□□□□ 0.29
HOXC13P31276 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.89■□□□□ 0.29
HOXC13P31276 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HOXC13P31276 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.89■□□□□ 0.29
HOXC13P31276 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC13P31276 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC13P31276 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC13P31276 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HOXC13P31276 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HOXC13P31276 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC13P31276 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HOXC13P31276 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC13P31276 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXC13P31276 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXC13P31276 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HOXC13P31276 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HOXC13P31276 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
HOXC13P31276 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC13P31276 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXC13P31276 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HOXC13P31276 CYP2T1P-202ENST00000641596 2535 ntBASIC16.88■□□□□ 0.29
HOXC13P31276 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXC13P31276 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXC13P31276 AL589702.1-201ENST00000641229 1509 ntBASIC16.88■□□□□ 0.29
HOXC13P31276 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HOXC13P31276 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HOXC13P31276 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXC13P31276 SPTLC1P1-201ENST00000447199 261 ntBASIC16.88■□□□□ 0.29
HOXC13P31276 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HOXC13P31276 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.88■□□□□ 0.29
HOXC13P31276 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC13P31276 AC003101.2-201ENST00000612557 442 ntBASIC16.88■□□□□ 0.29
HOXC13P31276 AC073592.8-201ENST00000624126 511 ntBASIC16.88■□□□□ 0.29
HOXC13P31276 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HOXC13P31276 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC13P31276 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC13P31276 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 PCDHB19P-201ENST00000570871 2371 ntBASIC16.88■□□□□ 0.29
HOXC13P31276 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC13P31276 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC13P31276 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXC13P31276 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC13P31276 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HOXC13P31276 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC13P31276 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC13P31276 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HOXC13P31276 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC13P31276 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC13P31276 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXC13P31276 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
HOXC13P31276 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC13P31276 AC124067.4-201ENST00000519691 2379 ntBASIC16.87■□□□□ 0.29
HOXC13P31276 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC13P31276 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC13P31276 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HOXC13P31276 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC13P31276 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC13P31276 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC13P31276 AP3S2-216ENST00000617003 1561 ntBASIC16.87■□□□□ 0.29
HOXC13P31276 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC13P31276 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC13P31276 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC13P31276 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HOXC13P31276 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC13P31276 PIN1P1-201ENST00000412108 996 ntBASIC16.87■□□□□ 0.29
HOXC13P31276 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC13P31276 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.87■□□□□ 0.29
HOXC13P31276 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC13P31276 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.87■□□□□ 0.29
HOXC13P31276 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms