Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.19■□□□□ 0.18
VARSP26640 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
VARSP26640 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
VARSP26640 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.19■□□□□ 0.18
VARSP26640 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.19■□□□□ 0.18
VARSP26640 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
VARSP26640 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
VARSP26640 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.19■□□□□ 0.18
VARSP26640 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VARSP26640 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
VARSP26640 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
VARSP26640 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.19■□□□□ 0.18
VARSP26640 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.19■□□□□ 0.18
VARSP26640 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.19■□□□□ 0.18
VARSP26640 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.19■□□□□ 0.18
VARSP26640 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.19■□□□□ 0.18
VARSP26640 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.19■□□□□ 0.18
VARSP26640 ACTL9-202ENST00000612068 1252 ntBASIC16.19■□□□□ 0.18
VARSP26640 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.19■□□□□ 0.18
VARSP26640 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
VARSP26640 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VARSP26640 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.19■□□□□ 0.18
VARSP26640 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.19■□□□□ 0.18
VARSP26640 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.19■□□□□ 0.18
VARSP26640 PAUPAR-201ENST00000630360 2965 ntBASIC16.19■□□□□ 0.18
VARSP26640 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VARSP26640 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.18■□□□□ 0.18
VARSP26640 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
VARSP26640 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 AC006538.1-201ENST00000567905 1585 ntBASIC16.18■□□□□ 0.18
VARSP26640 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VARSP26640 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 PRSS29P-201ENST00000440800 595 ntBASIC16.18■□□□□ 0.18
VARSP26640 VN2R19P-201ENST00000442399 1052 ntBASIC16.18■□□□□ 0.18
VARSP26640 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.18■□□□□ 0.18
VARSP26640 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.18■□□□□ 0.18
VARSP26640 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.18■□□□□ 0.18
VARSP26640 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.18■□□□□ 0.18
VARSP26640 AC005412.3-201ENST00000580309 715 ntBASIC16.18■□□□□ 0.18
VARSP26640 CYP2A7P1-201ENST00000595391 815 ntBASIC16.18■□□□□ 0.18
VARSP26640 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VARSP26640 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.18■□□□□ 0.18
VARSP26640 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.18■□□□□ 0.18
VARSP26640 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VARSP26640 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VARSP26640 AC024909.3-201ENST00000611513 2257 ntBASIC16.17■□□□□ 0.18
VARSP26640 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.17■□□□□ 0.18
VARSP26640 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.17■□□□□ 0.18
VARSP26640 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VARSP26640 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 AC099063.4-201ENST00000641099 1602 ntBASIC16.17■□□□□ 0.18
VARSP26640 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.17■□□□□ 0.18
VARSP26640 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
VARSP26640 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms