Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.96■□□□□ 0.63
ERCC3P19447 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.96■□□□□ 0.63
ERCC3P19447 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC3P19447 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ERCC3P19447 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ERCC3P19447 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.95■□□□□ 0.62
ERCC3P19447 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.95■□□□□ 0.62
ERCC3P19447 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC3P19447 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.95■□□□□ 0.62
ERCC3P19447 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC3P19447 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ERCC3P19447 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 AC009477.1-201ENST00000452936 217 ntBASIC18.95■□□□□ 0.62
ERCC3P19447 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.95■□□□□ 0.62
ERCC3P19447 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC3P19447 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.95■□□□□ 0.62
ERCC3P19447 AL596325.1-201ENST00000563991 1082 ntBASIC18.95■□□□□ 0.62
ERCC3P19447 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC3P19447 AC013467.2-201ENST00000605472 835 ntBASIC18.95■□□□□ 0.62
ERCC3P19447 TEX28P1-201ENST00000613479 1221 ntBASIC18.95■□□□□ 0.62
ERCC3P19447 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 TEX28P2-201ENST00000617764 1221 ntBASIC18.95■□□□□ 0.62
ERCC3P19447 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ERCC3P19447 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.95■□□□□ 0.62
ERCC3P19447 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC3P19447 AL358472.5-202ENST00000641448 1267 ntBASIC18.95■□□□□ 0.62
ERCC3P19447 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ERCC3P19447 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ERCC3P19447 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ERCC3P19447 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC3P19447 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 RNF216P1-203ENST00000404404 2427 ntBASIC18.94■□□□□ 0.62
ERCC3P19447 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ERCC3P19447 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.94■□□□□ 0.62
ERCC3P19447 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 MTND6P24-201ENST00000440466 518 ntBASIC18.94■□□□□ 0.62
ERCC3P19447 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.94■□□□□ 0.62
ERCC3P19447 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.94■□□□□ 0.62
ERCC3P19447 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.94■□□□□ 0.62
ERCC3P19447 AC009407.1-201ENST00000568958 598 ntBASIC18.94■□□□□ 0.62
ERCC3P19447 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.94■□□□□ 0.62
ERCC3P19447 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.94■□□□□ 0.62
ERCC3P19447 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.94■□□□□ 0.62
ERCC3P19447 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.94■□□□□ 0.62
ERCC3P19447 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 RN7SL828P-201ENST00000607615 303 ntBASIC18.94■□□□□ 0.62
ERCC3P19447 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
ERCC3P19447 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.94■□□□□ 0.62
ERCC3P19447 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.94■□□□□ 0.62
ERCC3P19447 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ERCC3P19447 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
ERCC3P19447 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ERCC3P19447 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
ERCC3P19447 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 AC092171.3-201ENST00000610122 2651 ntBASIC18.94■□□□□ 0.62
ERCC3P19447 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
ERCC3P19447 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.94■□□□□ 0.62
ERCC3P19447 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC3P19447 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ERCC3P19447 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.93■□□□□ 0.62
ERCC3P19447 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.93■□□□□ 0.62
ERCC3P19447 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.93■□□□□ 0.62
ERCC3P19447 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.93■□□□□ 0.62
ERCC3P19447 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ERCC3P19447 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms