Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ITGB4P16144 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITGB4P16144 REXO1L8P-201ENST00000604378 1897 ntBASIC20.58■□□□□ 0.88
ITGB4P16144 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGB4P16144 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ITGB4P16144 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGB4P16144 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.57■□□□□ 0.88
ITGB4P16144 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.57■□□□□ 0.88
ITGB4P16144 AC000095.1-201ENST00000603208 874 ntBASIC20.57■□□□□ 0.88
ITGB4P16144 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ITGB4P16144 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGB4P16144 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ITGB4P16144 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGB4P16144 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGB4P16144 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 AC022137.2-201ENST00000503482 481 ntBASIC20.57■□□□□ 0.88
ITGB4P16144 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.57■□□□□ 0.88
ITGB4P16144 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.57■□□□□ 0.88
ITGB4P16144 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGB4P16144 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.56■□□□□ 0.88
ITGB4P16144 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGB4P16144 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 AC026954.1-201ENST00000429771 1293 ntBASIC20.56■□□□□ 0.88
ITGB4P16144 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.56■□□□□ 0.88
ITGB4P16144 RPL13AP25-201ENST00000484130 612 ntBASIC20.56■□□□□ 0.88
ITGB4P16144 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGB4P16144 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.56■□□□□ 0.88
ITGB4P16144 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.56■□□□□ 0.88
ITGB4P16144 CLUHP6-201ENST00000580789 941 ntBASIC20.56■□□□□ 0.88
ITGB4P16144 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.56■□□□□ 0.88
ITGB4P16144 AL121723.1-201ENST00000445194 1519 ntBASIC20.56■□□□□ 0.88
ITGB4P16144 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGB4P16144 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ITGB4P16144 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGB4P16144 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
ITGB4P16144 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGB4P16144 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGB4P16144 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGB4P16144 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.55■□□□□ 0.88
ITGB4P16144 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.55■□□□□ 0.88
ITGB4P16144 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB4P16144 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.55■□□□□ 0.88
ITGB4P16144 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB4P16144 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGB4P16144 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGB4P16144 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGB4P16144 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGB4P16144 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB4P16144 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ITGB4P16144 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB4P16144 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGB4P16144 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGB4P16144 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGB4P16144 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGB4P16144 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITGB4P16144 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.55■□□□□ 0.88
ITGB4P16144 CNN2P8-201ENST00000421872 913 ntBASIC20.55■□□□□ 0.88
ITGB4P16144 AC016694.1-201ENST00000434179 700 ntBASIC20.55■□□□□ 0.88
ITGB4P16144 AC093433.1-201ENST00000458048 571 ntBASIC20.55■□□□□ 0.88
ITGB4P16144 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGB4P16144 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ITGB4P16144 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
ITGB4P16144 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
ITGB4P16144 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.55■□□□□ 0.88
ITGB4P16144 AC079316.1-201ENST00000548397 411 ntBASIC20.55■□□□□ 0.88
ITGB4P16144 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGB4P16144 ABBA01031663.1-201ENST00000635630 790 ntBASIC20.55■□□□□ 0.88
ITGB4P16144 AC068587.10-201ENST00000641210 219 ntBASIC20.55■□□□□ 0.88
ITGB4P16144 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGB4P16144 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.54■□□□□ 0.88
ITGB4P16144 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
ITGB4P16144 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.54■□□□□ 0.88
ITGB4P16144 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGB4P16144 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGB4P16144 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms