Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CCL4P13236 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.36■□□□□ 0.05
CCL4P13236 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CCL4P13236 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.36■□□□□ 0.05
CCL4P13236 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CCL4P13236 RN7SL837P-201ENST00000463010 287 ntBASIC15.36■□□□□ 0.05
CCL4P13236 ELK1P1-201ENST00000485699 580 ntBASIC15.36■□□□□ 0.05
CCL4P13236 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.36■□□□□ 0.05
CCL4P13236 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.36■□□□□ 0.05
CCL4P13236 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.36■□□□□ 0.05
CCL4P13236 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
CCL4P13236 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.36■□□□□ 0.05
CCL4P13236 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.36■□□□□ 0.05
CCL4P13236 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CCL4P13236 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
CCL4P13236 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.36■□□□□ 0.05
CCL4P13236 AL162274.1-201ENST00000617191 1098 ntBASIC15.36■□□□□ 0.05
CCL4P13236 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CCL4P13236 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CCL4P13236 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CCL4P13236 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CCL4P13236 AC105020.1-201ENST00000435356 2205 ntBASIC15.36■□□□□ 0.05
CCL4P13236 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCL4P13236 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.36■□□□□ 0.05
CCL4P13236 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 RNF216P1-203ENST00000404404 2427 ntBASIC15.35■□□□□ 0.05
CCL4P13236 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.35■□□□□ 0.05
CCL4P13236 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 LINC01144-201ENST00000626198 1710 ntBASIC15.35■□□□□ 0.05
CCL4P13236 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CCL4P13236 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CCL4P13236 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.35■□□□□ 0.05
CCL4P13236 AC079776.1-201ENST00000401540 1152 ntBASIC15.35■□□□□ 0.05
CCL4P13236 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 AC112492.5-201ENST00000421897 457 ntBASIC15.35■□□□□ 0.05
CCL4P13236 HLA-V-201ENST00000429037 534 ntBASIC15.35■□□□□ 0.05
CCL4P13236 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.35■□□□□ 0.05
CCL4P13236 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CCL4P13236 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CCL4P13236 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.35■□□□□ 0.05
CCL4P13236 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CCL4P13236 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 CYP4F24P-201ENST00000586049 1580 ntBASIC15.35■□□□□ 0.05
CCL4P13236 UBALD1-205ENST00000590891 2641 ntBASIC15.35■□□□□ 0.05
CCL4P13236 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.35■□□□□ 0.05
CCL4P13236 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CCL4P13236 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL4P13236 GGT3P-204ENST00000453783 1664 ntBASIC15.35■□□□□ 0.05
CCL4P13236 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.35■□□□□ 0.05
CCL4P13236 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CCL4P13236 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCL4P13236 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL4P13236 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
CCL4P13236 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms