Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC245100.3-201ENST00000441281 285 ntBASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 PAM16-204ENST00000571941 674 ntTSL 3 BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 PAM16-215ENST00000577031 548 ntTSL 4 BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 AL606495.2-201ENST00000605867 535 ntBASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 GGT4P-201ENST00000623672 1708 ntBASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
CSB-PGBD3P0DP91 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 KRT43P-201ENST00000434019 910 ntBASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 PACS1-203ENST00000524815 628 ntTSL 4 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 BTNL10-201ENST00000595971 695 ntBASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 DEK-201ENST00000244776 1441 ntTSL 2 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.54■■□□□ 1.04
CSB-PGBD3P0DP91 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 CYP4F24P-201ENST00000586049 1580 ntBASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 AL136982.4-201ENST00000437689 1740 ntBASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 FAM8A2P-201ENST00000528813 1142 ntBASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSB-PGBD3P0DP91 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 PP12613-201ENST00000424958 2230 ntBASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 F11R-206ENST00000621309 4770 ntTSL 5 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 NSL1-201ENST00000366976 722 ntTSL 2 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 FO393414.2-201ENST00000405153 598 ntBASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 HIST3H2BA-201ENST00000436555 524 ntBASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 RHOA-206ENST00000454011 889 ntTSL 2 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC21.52■■□□□ 1.04
CSB-PGBD3P0DP91 MIR4538-201ENST00000581377 78 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms