Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPNS1P04632 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPNS1P04632 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPNS1P04632 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPNS1P04632 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPNS1P04632 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPNS1P04632 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CAPNS1P04632 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPNS1P04632 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPNS1P04632 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPNS1P04632 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPNS1P04632 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPNS1P04632 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPNS1P04632 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.33■□□□□ 0.21
CAPNS1P04632 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.33■□□□□ 0.21
CAPNS1P04632 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.33■□□□□ 0.21
CAPNS1P04632 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPNS1P04632 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CAPNS1P04632 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CAPNS1P04632 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.33■□□□□ 0.21
CAPNS1P04632 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.33■□□□□ 0.21
CAPNS1P04632 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
CAPNS1P04632 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPNS1P04632 AC126177.1-201ENST00000547829 2218 ntBASIC16.33■□□□□ 0.2
CAPNS1P04632 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.33■□□□□ 0.2
CAPNS1P04632 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPNS1P04632 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.33■□□□□ 0.2
CAPNS1P04632 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.33■□□□□ 0.2
CAPNS1P04632 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.33■□□□□ 0.2
CAPNS1P04632 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPNS1P04632 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPNS1P04632 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 AC084121.4-201ENST00000641598 221 ntBASIC16.33■□□□□ 0.2
CAPNS1P04632 AF228730.8-201ENST00000642140 221 ntBASIC16.33■□□□□ 0.2
CAPNS1P04632 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPNS1P04632 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CAPNS1P04632 CU639417.3-201ENST00000624240 1404 ntBASIC16.33■□□□□ 0.2
CAPNS1P04632 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPNS1P04632 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPNS1P04632 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPNS1P04632 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CAPNS1P04632 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CAPNS1P04632 AC097637.2-201ENST00000624096 1997 ntBASIC16.33■□□□□ 0.2
CAPNS1P04632 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.33■□□□□ 0.2
CAPNS1P04632 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.33■□□□□ 0.2
CAPNS1P04632 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CAPNS1P04632 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CAPNS1P04632 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPNS1P04632 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPNS1P04632 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.32■□□□□ 0.2
CAPNS1P04632 LINC00982-205ENST00000420957 435 ntBASIC16.32■□□□□ 0.2
CAPNS1P04632 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.32■□□□□ 0.2
CAPNS1P04632 AC092580.3-201ENST00000430932 139 ntBASIC16.32■□□□□ 0.2
CAPNS1P04632 RBPMS2P1-201ENST00000437762 623 ntBASIC16.32■□□□□ 0.2
CAPNS1P04632 AC140658.5-201ENST00000438532 169 ntBASIC16.32■□□□□ 0.2
CAPNS1P04632 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 AL513480.1-201ENST00000451731 511 ntBASIC16.32■□□□□ 0.2
CAPNS1P04632 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPNS1P04632 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPNS1P04632 AL512638.1-201ENST00000457493 794 ntBASIC16.32■□□□□ 0.2
CAPNS1P04632 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPNS1P04632 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPNS1P04632 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPNS1P04632 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPNS1P04632 LINC01225-203ENST00000563550 1244 ntBASIC16.32■□□□□ 0.2
CAPNS1P04632 AC026150.2-201ENST00000564693 1156 ntBASIC16.32■□□□□ 0.2
CAPNS1P04632 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPNS1P04632 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPNS1P04632 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms