Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
VTNP04004 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.88■□□□□ 0.45
VTNP04004 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.88■□□□□ 0.45
VTNP04004 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.88■□□□□ 0.45
VTNP04004 AP005018.1-201ENST00000525475 301 ntBASIC17.88■□□□□ 0.45
VTNP04004 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.88■□□□□ 0.45
VTNP04004 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.88■□□□□ 0.45
VTNP04004 AC010336.2-201ENST00000564226 506 ntBASIC17.88■□□□□ 0.45
VTNP04004 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.88■□□□□ 0.45
VTNP04004 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.88■□□□□ 0.45
VTNP04004 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.88■□□□□ 0.45
VTNP04004 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.88■□□□□ 0.45
VTNP04004 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.88■□□□□ 0.45
VTNP04004 AC239800.4-201ENST00000603712 296 ntBASIC17.88■□□□□ 0.45
VTNP04004 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VTNP04004 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VTNP04004 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.88■□□□□ 0.45
VTNP04004 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.88■□□□□ 0.45
VTNP04004 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.88■□□□□ 0.45
VTNP04004 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTNP04004 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.88■□□□□ 0.45
VTNP04004 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.88■□□□□ 0.45
VTNP04004 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.88■□□□□ 0.45
VTNP04004 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.87■□□□□ 0.45
VTNP04004 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
VTNP04004 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.87■□□□□ 0.45
VTNP04004 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 PIN1P1-201ENST00000412108 996 ntBASIC17.87■□□□□ 0.45
VTNP04004 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
VTNP04004 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.87■□□□□ 0.45
VTNP04004 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.87■□□□□ 0.45
VTNP04004 RN7SL618P-201ENST00000477850 296 ntBASIC17.87■□□□□ 0.45
VTNP04004 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.87■□□□□ 0.45
VTNP04004 AC135586.1-201ENST00000539323 574 ntBASIC17.87■□□□□ 0.45
VTNP04004 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.87■□□□□ 0.45
VTNP04004 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.87■□□□□ 0.45
VTNP04004 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VTNP04004 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.87■□□□□ 0.45
VTNP04004 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VTNP04004 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTNP04004 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.87■□□□□ 0.45
VTNP04004 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.87■□□□□ 0.45
VTNP04004 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.86■□□□□ 0.45
VTNP04004 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.86■□□□□ 0.45
VTNP04004 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.86■□□□□ 0.45
VTNP04004 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
VTNP04004 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 AL139010.1-201ENST00000454878 894 ntBASIC17.86■□□□□ 0.45
VTNP04004 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.86■□□□□ 0.45
VTNP04004 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 AC044860.1-202ENST00000559481 777 ntBASIC17.86■□□□□ 0.45
VTNP04004 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.86■□□□□ 0.45
VTNP04004 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.86■□□□□ 0.45
VTNP04004 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.86■□□□□ 0.45
VTNP04004 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.86■□□□□ 0.45
VTNP04004 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.86■□□□□ 0.45
VTNP04004 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.86■□□□□ 0.45
VTNP04004 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 KRT8P12-202ENST00000472924 1397 ntBASIC17.86■□□□□ 0.45
VTNP04004 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
VTNP04004 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.86■□□□□ 0.45
VTNP04004 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
VTNP04004 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.86■□□□□ 0.45
VTNP04004 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
VTNP04004 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 ALOX12P2-203ENST00000570921 1945 ntBASIC17.86■□□□□ 0.45
VTNP04004 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VTNP04004 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms