Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.48■□□□□ 0.39
TIMP1P01033 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
TIMP1P01033 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TIMP1P01033 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.48■□□□□ 0.39
TIMP1P01033 RHOXF1P1-202ENST00000635473 501 ntBASIC17.48■□□□□ 0.39
TIMP1P01033 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.48■□□□□ 0.39
TIMP1P01033 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TIMP1P01033 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.48■□□□□ 0.39
TIMP1P01033 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 AL691432.1-201ENST00000596308 1422 ntBASIC17.47■□□□□ 0.39
TIMP1P01033 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.47■□□□□ 0.39
TIMP1P01033 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.47■□□□□ 0.39
TIMP1P01033 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.47■□□□□ 0.39
TIMP1P01033 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TIMP1P01033 HCG11-201ENST00000411553 5696 ntBASIC17.47■□□□□ 0.39
TIMP1P01033 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TIMP1P01033 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 AC067852.2-201ENST00000590513 2313 ntBASIC17.47■□□□□ 0.39
TIMP1P01033 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TIMP1P01033 C1QBPP1-201ENST00000400117 770 ntBASIC17.47■□□□□ 0.39
TIMP1P01033 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 AC074338.1-201ENST00000416825 156 ntBASIC17.47■□□□□ 0.39
TIMP1P01033 EEF1DP4-201ENST00000446006 880 ntBASIC17.47■□□□□ 0.39
TIMP1P01033 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.47■□□□□ 0.39
TIMP1P01033 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.47■□□□□ 0.39
TIMP1P01033 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.47■□□□□ 0.39
TIMP1P01033 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TIMP1P01033 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.47■□□□□ 0.39
TIMP1P01033 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.47■□□□□ 0.39
TIMP1P01033 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.47■□□□□ 0.39
TIMP1P01033 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.47■□□□□ 0.39
TIMP1P01033 AL118558.3-201ENST00000607414 1079 ntBASIC17.47■□□□□ 0.39
TIMP1P01033 AC244669.2-201ENST00000612320 853 ntBASIC17.47■□□□□ 0.39
TIMP1P01033 AC008687.7-202ENST00000637404 953 ntBASIC17.47■□□□□ 0.39
TIMP1P01033 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.47■□□□□ 0.39
TIMP1P01033 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.47■□□□□ 0.39
TIMP1P01033 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.47■□□□□ 0.39
TIMP1P01033 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TIMP1P01033 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TIMP1P01033 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.47■□□□□ 0.39
TIMP1P01033 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.47■□□□□ 0.39
TIMP1P01033 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TIMP1P01033 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
TIMP1P01033 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.46■□□□□ 0.39
TIMP1P01033 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.46■□□□□ 0.39
TIMP1P01033 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
TIMP1P01033 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 TOMM22P5-201ENST00000416399 439 ntBASIC17.46■□□□□ 0.39
TIMP1P01033 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.46■□□□□ 0.39
TIMP1P01033 TARDBPP1-201ENST00000442013 1203 ntBASIC17.46■□□□□ 0.39
TIMP1P01033 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TIMP1P01033 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.46■□□□□ 0.39
TIMP1P01033 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.46■□□□□ 0.39
TIMP1P01033 RNA5SP423-201ENST00000517127 109 ntBASIC17.46■□□□□ 0.39
TIMP1P01033 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.46■□□□□ 0.39
TIMP1P01033 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.46■□□□□ 0.39
TIMP1P01033 AC120045.2-201ENST00000567334 178 ntBASIC17.46■□□□□ 0.39
TIMP1P01033 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 RN7SL190P-201ENST00000582519 257 ntBASIC17.46■□□□□ 0.39
TIMP1P01033 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.46■□□□□ 0.39
TIMP1P01033 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.46■□□□□ 0.39
TIMP1P01033 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP1P01033 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TIMP1P01033 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.46■□□□□ 0.39
TIMP1P01033 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TIMP1P01033 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms