Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MSI1O43347 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17■□□□□ 0.31
MSI1O43347 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17■□□□□ 0.31
MSI1O43347 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
MSI1O43347 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17■□□□□ 0.31
MSI1O43347 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 HLA-DRB6-201ENST00000411500 1235 ntBASIC17■□□□□ 0.31
MSI1O43347 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17■□□□□ 0.31
MSI1O43347 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17■□□□□ 0.31
MSI1O43347 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MSI1O43347 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
MSI1O43347 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17■□□□□ 0.31
MSI1O43347 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17■□□□□ 0.31
MSI1O43347 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
MSI1O43347 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17■□□□□ 0.31
MSI1O43347 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17■□□□□ 0.31
MSI1O43347 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17■□□□□ 0.31
MSI1O43347 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
MSI1O43347 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.99■□□□□ 0.31
MSI1O43347 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.99■□□□□ 0.31
MSI1O43347 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.99■□□□□ 0.31
MSI1O43347 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
MSI1O43347 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 FAM220BP-201ENST00000377689 816 ntBASIC16.99■□□□□ 0.31
MSI1O43347 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
MSI1O43347 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.99■□□□□ 0.31
MSI1O43347 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.99■□□□□ 0.31
MSI1O43347 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.99■□□□□ 0.31
MSI1O43347 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.99■□□□□ 0.31
MSI1O43347 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 AC003101.2-201ENST00000612557 442 ntBASIC16.99■□□□□ 0.31
MSI1O43347 AC018529.1-201ENST00000613063 361 ntBASIC16.99■□□□□ 0.31
MSI1O43347 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.99■□□□□ 0.31
MSI1O43347 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
MSI1O43347 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.99■□□□□ 0.31
MSI1O43347 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.99■□□□□ 0.31
MSI1O43347 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.99■□□□□ 0.31
MSI1O43347 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.99■□□□□ 0.31
MSI1O43347 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.99■□□□□ 0.31
MSI1O43347 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
MSI1O43347 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
MSI1O43347 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.99■□□□□ 0.31
MSI1O43347 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
MSI1O43347 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSI1O43347 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MSI1O43347 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MSI1O43347 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MSI1O43347 TUBB3P1-201ENST00000405796 1332 ntBASIC16.98■□□□□ 0.31
MSI1O43347 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MSI1O43347 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.98■□□□□ 0.31
MSI1O43347 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.98■□□□□ 0.31
MSI1O43347 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 AL391005.1-201ENST00000623953 2435 ntBASIC16.98■□□□□ 0.31
MSI1O43347 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
MSI1O43347 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
MSI1O43347 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
MSI1O43347 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 SPDYE7P-202ENST00000420373 878 ntBASIC16.98■□□□□ 0.31
MSI1O43347 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.98■□□□□ 0.31
MSI1O43347 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.98■□□□□ 0.31
MSI1O43347 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.98■□□□□ 0.31
MSI1O43347 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.98■□□□□ 0.31
MSI1O43347 POU5F1P6-201ENST00000466990 990 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms