Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCC4O15439 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.74■□□□□ 0.91
ABCC4O15439 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCC4O15439 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
ABCC4O15439 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCC4O15439 AC063926.2-201ENST00000623766 1308 ntBASIC20.74■□□□□ 0.91
ABCC4O15439 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
ABCC4O15439 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ABCC4O15439 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCC4O15439 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCC4O15439 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCC4O15439 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCC4O15439 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCC4O15439 SERBP1P5-201ENST00000510079 1181 ntBASIC20.74■□□□□ 0.91
ABCC4O15439 AP005018.1-201ENST00000525475 301 ntBASIC20.74■□□□□ 0.91
ABCC4O15439 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.74■□□□□ 0.91
ABCC4O15439 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ABCC4O15439 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCC4O15439 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCC4O15439 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ABCC4O15439 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ABCC4O15439 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCC4O15439 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ABCC4O15439 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCC4O15439 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ABCC4O15439 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCC4O15439 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCC4O15439 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.73■□□□□ 0.91
ABCC4O15439 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCC4O15439 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.73■□□□□ 0.91
ABCC4O15439 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCC4O15439 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ABCC4O15439 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
ABCC4O15439 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCC4O15439 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCC4O15439 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ABCC4O15439 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCC4O15439 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCC4O15439 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCC4O15439 TSSK5P-201ENST00000423978 907 ntBASIC20.73■□□□□ 0.91
ABCC4O15439 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.73■□□□□ 0.91
ABCC4O15439 AC241585.1-201ENST00000433527 519 ntBASIC20.73■□□□□ 0.91
ABCC4O15439 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.73■□□□□ 0.91
ABCC4O15439 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.73■□□□□ 0.91
ABCC4O15439 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.73■□□□□ 0.91
ABCC4O15439 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCC4O15439 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.73■□□□□ 0.91
ABCC4O15439 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ABCC4O15439 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 AC100757.3-201ENST00000622361 1406 ntBASIC20.72■□□□□ 0.91
ABCC4O15439 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.72■□□□□ 0.91
ABCC4O15439 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.72■□□□□ 0.91
ABCC4O15439 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.72■□□□□ 0.91
ABCC4O15439 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.72■□□□□ 0.91
ABCC4O15439 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.72■□□□□ 0.91
ABCC4O15439 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.72■□□□□ 0.91
ABCC4O15439 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
ABCC4O15439 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ABCC4O15439 CRB3P1-201ENST00000449338 276 ntBASIC20.72■□□□□ 0.91
ABCC4O15439 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.72■□□□□ 0.91
ABCC4O15439 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.72■□□□□ 0.91
ABCC4O15439 RARRES2P9-201ENST00000565168 469 ntBASIC20.72■□□□□ 0.91
ABCC4O15439 SPDYE12P-201ENST00000618416 771 ntBASIC20.72■□□□□ 0.91
ABCC4O15439 AC073592.8-201ENST00000624126 511 ntBASIC20.72■□□□□ 0.91
ABCC4O15439 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ABCC4O15439 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCC4O15439 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCC4O15439 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCC4O15439 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ABCC4O15439 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.71■□□□□ 0.91
ABCC4O15439 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCC4O15439 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.71■□□□□ 0.91
ABCC4O15439 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCC4O15439 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ABCC4O15439 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCC4O15439 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ABCC4O15439 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ABCC4O15439 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ABCC4O15439 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCC4O15439 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ABCC4O15439 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ABCC4O15439 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms