Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.23■□□□□ 0.19
IFRD1O00458 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.23■□□□□ 0.19
IFRD1O00458 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.23■□□□□ 0.19
IFRD1O00458 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.23■□□□□ 0.19
IFRD1O00458 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.23■□□□□ 0.19
IFRD1O00458 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.23■□□□□ 0.19
IFRD1O00458 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.23■□□□□ 0.19
IFRD1O00458 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.23■□□□□ 0.19
IFRD1O00458 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
IFRD1O00458 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IFRD1O00458 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.23■□□□□ 0.19
IFRD1O00458 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.23■□□□□ 0.19
IFRD1O00458 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFRD1O00458 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
IFRD1O00458 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
IFRD1O00458 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
IFRD1O00458 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.22■□□□□ 0.19
IFRD1O00458 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.22■□□□□ 0.19
IFRD1O00458 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.22■□□□□ 0.19
IFRD1O00458 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
IFRD1O00458 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.22■□□□□ 0.19
IFRD1O00458 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
IFRD1O00458 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.22■□□□□ 0.19
IFRD1O00458 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.22■□□□□ 0.19
IFRD1O00458 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.22■□□□□ 0.19
IFRD1O00458 SPDYE11-202ENST00000450699 704 ntBASIC16.22■□□□□ 0.19
IFRD1O00458 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.22■□□□□ 0.19
IFRD1O00458 AC004967.1-201ENST00000453589 447 ntBASIC16.22■□□□□ 0.19
IFRD1O00458 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.22■□□□□ 0.19
IFRD1O00458 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IFRD1O00458 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
IFRD1O00458 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
IFRD1O00458 SPDYE9P-201ENST00000570642 692 ntBASIC16.22■□□□□ 0.19
IFRD1O00458 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
IFRD1O00458 AC026120.1-201ENST00000611536 926 ntBASIC16.22■□□□□ 0.19
IFRD1O00458 SPDYE10P-202ENST00000612005 668 ntBASIC16.22■□□□□ 0.19
IFRD1O00458 SPDYE8P-202ENST00000612377 668 ntBASIC16.22■□□□□ 0.19
IFRD1O00458 AC020765.3-201ENST00000613051 740 ntBASIC16.22■□□□□ 0.19
IFRD1O00458 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.22■□□□□ 0.19
IFRD1O00458 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IFRD1O00458 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.22■□□□□ 0.19
IFRD1O00458 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 AL162727.3-201ENST00000635661 2787 ntBASIC16.22■□□□□ 0.19
IFRD1O00458 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFRD1O00458 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 AC016027.1-202ENST00000607927 1699 ntBASIC16.21■□□□□ 0.19
IFRD1O00458 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.21■□□□□ 0.19
IFRD1O00458 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.21■□□□□ 0.19
IFRD1O00458 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
IFRD1O00458 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 ME2P1-201ENST00000426028 1970 ntBASIC16.21■□□□□ 0.19
IFRD1O00458 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
IFRD1O00458 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
IFRD1O00458 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
IFRD1O00458 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFRD1O00458 TFAMP1-201ENST00000412727 736 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms