Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 REXO1L8P-201ENST00000604378 1897 ntBASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 AC005237.2-201ENST00000434368 219 ntBASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 AL135744.1-201ENST00000565098 629 ntBASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 RARRES2P8-201ENST00000566335 367 ntBASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 AL161645.1-201ENST00000622716 1255 ntBASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 AL592309.1-201ENST00000443127 649 ntBASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 POU5F1P6-201ENST00000466990 990 ntBASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 RN7SL589P-201ENST00000481268 310 ntBASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 AC079140.1-201ENST00000508039 487 ntBASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 AC020765.3-201ENST00000613051 740 ntBASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPDC1A2A3K4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 AL627223.1-201ENST00000416693 442 ntBASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 AC093520.2-201ENST00000561830 333 ntBASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 LINC00628-201ENST00000628516 1289 ntBASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPDC1A2A3K4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPDC1A2A3K4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
PTPDC1A2A3K4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTPDC1A2A3K4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
PTPDC1A2A3K4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PTPDC1A2A3K4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTPDC1A2A3K4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.27■□□□□ 0.67
PTPDC1A2A3K4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPDC1A2A3K4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPDC1A2A3K4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms