Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 BTNL10-201ENST00000595971 695 ntBASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 RPSAP52-203ENST00000622976 1023 ntBASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCFC2Q9Y5Z7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 KRT43P-201ENST00000434019 910 ntBASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 USP32P1-208ENST00000506594 1164 ntBASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HCFC2Q9Y5Z7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 U82695.1-201ENST00000635752 1889 ntBASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 MIR4321-201ENST00000592276 80 ntBASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 AC018665.1-201ENST00000622927 1362 ntBASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms