Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHA3Q9Y5H8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.34
PCDHA3Q9Y5H8 AC092919.2-201ENST00000623631 1645 ntBASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 AC016027.1-202ENST00000607927 1699 ntBASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 AC079781.3-201ENST00000449110 356 ntBASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 AC092910.1-201ENST00000482027 1129 ntBASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 AC108751.1-201ENST00000490852 363 ntBASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHA3Q9Y5H8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 IGLL3P-201ENST00000412472 434 ntBASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 VN2R19P-201ENST00000442399 1052 ntBASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 MIR4751-201ENST00000578027 74 ntBASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA3Q9Y5H8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 AC093724.1-201ENST00000448659 1027 ntBASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 AL049840.3-201ENST00000602669 611 ntBASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA3Q9Y5H8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms