Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 AC091167.2-201ENST00000579581 588 ntBASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 MIR4492-201ENST00000581627 80 ntBASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 PGM5P2-202ENST00000637225 1043 ntBASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 GGT4P-201ENST00000623672 1708 ntBASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 PMS2P1-201ENST00000431037 1228 ntBASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 AC092910.1-201ENST00000482027 1129 ntBASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 AL160237.2-201ENST00000556165 472 ntBASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 AL049840.3-201ENST00000602669 611 ntBASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 AL773604.1-201ENST00000617417 272 ntBASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 AC131009.4-201ENST00000624048 1740 ntBASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 PAUPAR-201ENST00000630360 2965 ntBASIC14.43□□□□□ -0.1
RHBDD3Q9Y3P4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 SLC22A20-204ENST00000530038 1673 ntBASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 AL596257.1-201ENST00000641463 2694 ntBASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms