Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNRF3Q9ULT6 PCGF3-213ENST00000620529 1899 ntBASIC19.48■□□□□ 0.71
ZNRF3Q9ULT6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNRF3Q9ULT6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
ZNRF3Q9ULT6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 AC005229.1-201ENST00000392885 409 ntBASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 AC103810.3-201ENST00000583567 96 ntBASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 AC244093.1-201ENST00000610837 814 ntBASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNRF3Q9ULT6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 FAM86LP-201ENST00000478302 853 ntBASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 ENPP7P5-201ENST00000541031 1031 ntBASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNRF3Q9ULT6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 AC006538.1-201ENST00000567905 1585 ntBASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 HTR7P1-202ENST00000624664 4411 ntBASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 AC108725.1-201ENST00000495472 409 ntBASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 AP000812.2-201ENST00000538934 718 ntBASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF3Q9ULT6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNRF3Q9ULT6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNRF3Q9ULT6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ZNRF3Q9ULT6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNRF3Q9ULT6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZNRF3Q9ULT6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ZNRF3Q9ULT6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNRF3Q9ULT6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ZNRF3Q9ULT6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZNRF3Q9ULT6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNRF3Q9ULT6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNRF3Q9ULT6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms