Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 AC245100.5-201ENST00000452108 331 ntBASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
TMEM248Q9NWD8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 SPDYE7P-202ENST00000420373 878 ntBASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 METTL21AP1-201ENST00000438852 635 ntBASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 AC018529.1-201ENST00000613063 361 ntBASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 AC124067.4-201ENST00000519691 2379 ntBASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM248Q9NWD8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 AL596087.1-201ENST00000400979 1969 ntBASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 AC079328.2-201ENST00000561241 3354 ntBASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 AC069262.1-201ENST00000539058 672 ntBASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM248Q9NWD8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms