Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 AL049840.3-201ENST00000602669 611 ntBASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 LINC02084-201ENST00000606069 1096 ntBASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 AC008608.2-201ENST00000606089 416 ntBASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 FAM45BP-202ENST00000592932 1624 ntBASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 AC023157.3-201ENST00000619086 2088 ntBASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 POU5F1P6-201ENST00000466990 990 ntBASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 MIR5100-201ENST00000579544 119 ntBASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 AC016027.1-202ENST00000607927 1699 ntBASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCM2LQ9NUG4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms