Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 AC091812.2-201ENST00000619081 385 ntBASIC16.33■□□□□ 0.2
TREX1Q9NSU2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 AP005117.1-202ENST00000581724 1908 ntBASIC16.33■□□□□ 0.2
TREX1Q9NSU2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TREX1Q9NSU2 AC105917.1-201ENST00000506637 2539 ntBASIC16.33■□□□□ 0.2
TREX1Q9NSU2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 AC023274.1-201ENST00000418278 595 ntBASIC16.32■□□□□ 0.2
TREX1Q9NSU2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 PMS2P7-201ENST00000506558 1336 ntBASIC16.32■□□□□ 0.2
TREX1Q9NSU2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 PGAM5P1-201ENST00000518923 814 ntBASIC16.32■□□□□ 0.2
TREX1Q9NSU2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 AL138918.1-201ENST00000568306 659 ntBASIC16.32■□□□□ 0.2
TREX1Q9NSU2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 AC132872.4-202ENST00000622924 2756 ntBASIC16.32■□□□□ 0.2
TREX1Q9NSU2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TREX1Q9NSU2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 FOXO1B-201ENST00000504678 1527 ntBASIC16.31■□□□□ 0.2
TREX1Q9NSU2 PAUPAR-201ENST00000630360 2965 ntBASIC16.31■□□□□ 0.2
TREX1Q9NSU2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 AKAP8P1-201ENST00000434743 1349 ntBASIC16.31■□□□□ 0.2
TREX1Q9NSU2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TREX1Q9NSU2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms