Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PFDN4Q9NQP4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN4Q9NQP4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PFDN4Q9NQP4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PFDN4Q9NQP4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN4Q9NQP4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN4Q9NQP4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN4Q9NQP4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.28■□□□□ 0.2
PFDN4Q9NQP4 AP005117.1-201ENST00000584346 1413 ntBASIC16.28■□□□□ 0.2
PFDN4Q9NQP4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN4Q9NQP4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 SBF1P1-201ENST00000444527 5631 ntBASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 MTDHP3-201ENST00000594186 672 ntBASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN4Q9NQP4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 GGT3P-204ENST00000453783 1664 ntBASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN4Q9NQP4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 OR2I1P-209ENST00000641730 5365 ntBASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 AC092364.2-201ENST00000596710 2692 ntBASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 CLEC4GP1-201ENST00000596555 870 ntBASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 AL589182.2-201ENST00000619332 1049 ntBASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN4Q9NQP4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms