Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.97■□□□□ 0.31
HPS4Q9NQG7 AP001094.4-201ENST00000579008 2176 ntBASIC16.97■□□□□ 0.31
HPS4Q9NQG7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 AC009477.1-201ENST00000452936 217 ntBASIC16.97■□□□□ 0.31
HPS4Q9NQG7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 BANF1P1-201ENST00000553684 263 ntBASIC16.97■□□□□ 0.31
HPS4Q9NQG7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 SPDYE22P-201ENST00000582158 798 ntBASIC16.97■□□□□ 0.31
HPS4Q9NQG7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.97■□□□□ 0.31
HPS4Q9NQG7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HPS4Q9NQG7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 KRT8P39-201ENST00000396270 1433 ntBASIC16.96■□□□□ 0.31
HPS4Q9NQG7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 PIN1P1-201ENST00000412108 996 ntBASIC16.96■□□□□ 0.31
HPS4Q9NQG7 AL353705.2-201ENST00000428243 662 ntBASIC16.96■□□□□ 0.31
HPS4Q9NQG7 SPTLC1P1-201ENST00000447199 261 ntBASIC16.96■□□□□ 0.31
HPS4Q9NQG7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 TEX28P1-201ENST00000613479 1221 ntBASIC16.96■□□□□ 0.31
HPS4Q9NQG7 AL662799.1-202ENST00000614205 422 ntBASIC16.96■□□□□ 0.31
HPS4Q9NQG7 TEX28P2-201ENST00000617764 1221 ntBASIC16.96■□□□□ 0.31
HPS4Q9NQG7 AL035456.1-201ENST00000456064 1369 ntBASIC16.96■□□□□ 0.31
HPS4Q9NQG7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HPS4Q9NQG7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
HPS4Q9NQG7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HPS4Q9NQG7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HPS4Q9NQG7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 AL118508.1-201ENST00000613502 2345 ntBASIC16.95■□□□□ 0.3
HPS4Q9NQG7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HPS4Q9NQG7 AC098859.1-201ENST00000502915 1238 ntBASIC16.95■□□□□ 0.3
HPS4Q9NQG7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms