Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 RHOQP3-201ENST00000437982 621 ntBASIC16.98■□□□□ 0.31
PCDH9Q9HC56 KRT18P3-201ENST00000451602 1288 ntBASIC16.98■□□□□ 0.31
PCDH9Q9HC56 AL513480.1-201ENST00000451731 511 ntBASIC16.98■□□□□ 0.31
PCDH9Q9HC56 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 RNA5SP416-201ENST00000516838 111 ntBASIC16.98■□□□□ 0.31
PCDH9Q9HC56 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH9Q9HC56 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 CDC14C-201ENST00000428251 1719 ntBASIC16.97■□□□□ 0.31
PCDH9Q9HC56 MIR574-201ENST00000385209 96 ntBASIC16.97■□□□□ 0.31
PCDH9Q9HC56 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 AP000347.1-202ENST00000435868 847 ntBASIC16.97■□□□□ 0.31
PCDH9Q9HC56 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 AC018845.2-201ENST00000568326 409 ntBASIC16.97■□□□□ 0.31
PCDH9Q9HC56 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDH9Q9HC56 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 AC012569.1-201ENST00000591191 1524 ntBASIC16.96■□□□□ 0.31
PCDH9Q9HC56 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.96■□□□□ 0.31
PCDH9Q9HC56 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 MIR940-201ENST00000401276 94 ntBASIC16.96■□□□□ 0.31
PCDH9Q9HC56 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 KRT18P58-201ENST00000527480 1120 ntBASIC16.96■□□□□ 0.31
PCDH9Q9HC56 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 MIR4515-201ENST00000584082 81 ntBASIC16.96■□□□□ 0.31
PCDH9Q9HC56 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 AC007064.4-201ENST00000637740 555 ntBASIC16.96■□□□□ 0.31
PCDH9Q9HC56 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PCDH9Q9HC56 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms