Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 AC012454.1-201ENST00000443948 995 ntBASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 SEPT14P1-201ENST00000458703 648 ntBASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 AC091167.2-201ENST00000579581 588 ntBASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 DKFZP434H168-201ENST00000567381 1905 ntBASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 AP003680.1-201ENST00000598970 3660 ntBASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 AL592424.1-201ENST00000563624 1536 ntBASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC8.38□□□□□ -1.07
KRTAP3-1Q9BYR8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC005622.1-201ENST00000636801 1703 ntBASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC092919.2-201ENST00000623631 1645 ntBASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC020658.6-201ENST00000623564 1870 ntBASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AL121949.1-201ENST00000402043 968 ntBASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 PTCHD3P3-201ENST00000403073 906 ntBASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC132008.2-207ENST00000454517 770 ntBASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC107918.2-201ENST00000530817 355 ntBASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AP002807.1-203ENST00000534517 664 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 PNN-202ENST00000553331 656 ntTSL 3 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC8.37□□□□□ -1.07
KRTAP3-1Q9BYR8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms