Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 ANKRD26P2-201ENST00000445530 1710 ntBASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP3-3Q9BYR6 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 VSNL1-201ENST00000295156 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AL023280.1-201ENST00000414840 1423 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AC003102.1-202ENST00000563394 1796 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AL139806.1-201ENST00000403057 1002 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 CCDC148-203ENST00000409889 1160 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 UBE2V1P9-201ENST00000414760 368 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 RPL21P32-201ENST00000419877 477 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 UBE2V1P3-201ENST00000439651 417 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AC000041.1-201ENST00000439655 175 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 RBMY2AP-201ENST00000445405 1157 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 RBMY2CP-201ENST00000448575 1157 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 RBMY2DP-202ENST00000448881 1157 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 CCNJP1-201ENST00000450600 1149 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 BX842568.2-201ENST00000453595 1230 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 RIIAD1-206ENST00000479191 449 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AC092611.2-201ENST00000508664 304 ntTSL 3 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AKIRIN1P1-201ENST00000547384 544 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AC078886.1-201ENST00000549144 554 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AL049874.4-201ENST00000557593 255 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 ZNF793-AS1-204ENST00000588845 545 ntTSL 3 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AC020915.5-201ENST00000596836 964 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 TEX101-201ENST00000598265 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AC243960.2-201ENST00000600996 747 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 SPDL1-216ENST00000629457 340 ntTSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 AC092667.1-201ENST00000434301 2586 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 Z99496.1-201ENST00000469424 1477 ntBASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-3Q9BYR6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC106872.1-201ENST00000512492 1360 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms