Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
USB1Q9BQ65 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
USB1Q9BQ65 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
USB1Q9BQ65 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 PMS2P4-201ENST00000412466 1052 ntBASIC14.77□□□□□ -0.05
USB1Q9BQ65 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
USB1Q9BQ65 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 DNAJB3-202ENST00000449667 1266 ntBASIC14.77□□□□□ -0.05
USB1Q9BQ65 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 AC109635.5-201ENST00000533593 962 ntBASIC14.77□□□□□ -0.05
USB1Q9BQ65 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
USB1Q9BQ65 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 AC087641.1-201ENST00000557561 1021 ntBASIC14.77□□□□□ -0.05
USB1Q9BQ65 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
USB1Q9BQ65 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.77□□□□□ -0.05
USB1Q9BQ65 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
USB1Q9BQ65 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
USB1Q9BQ65 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
USB1Q9BQ65 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
USB1Q9BQ65 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
USB1Q9BQ65 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 KRT8P49-201ENST00000604166 1432 ntBASIC14.76□□□□□ -0.05
USB1Q9BQ65 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 AKAP8P1-201ENST00000434743 1349 ntBASIC14.76□□□□□ -0.05
USB1Q9BQ65 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 RN7SL589P-201ENST00000481268 310 ntBASIC14.76□□□□□ -0.05
USB1Q9BQ65 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
USB1Q9BQ65 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
USB1Q9BQ65 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.75□□□□□ -0.05
USB1Q9BQ65 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
USB1Q9BQ65 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.75□□□□□ -0.05
USB1Q9BQ65 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.75□□□□□ -0.05
USB1Q9BQ65 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.75□□□□□ -0.05
USB1Q9BQ65 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.75□□□□□ -0.05
USB1Q9BQ65 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
USB1Q9BQ65 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
USB1Q9BQ65 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.75□□□□□ -0.05
USB1Q9BQ65 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms