Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.63□□□□□ -0.23
GAFA1Q96PS6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 AL627223.1-201ENST00000416693 442 ntBASIC13.63□□□□□ -0.23
GAFA1Q96PS6 AC254562.1-201ENST00000417586 456 ntBASIC13.63□□□□□ -0.23
GAFA1Q96PS6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 AC098859.1-201ENST00000502915 1238 ntBASIC13.63□□□□□ -0.23
GAFA1Q96PS6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 SLC25A39P2-201ENST00000537614 270 ntBASIC13.63□□□□□ -0.23
GAFA1Q96PS6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 AC004835.2-201ENST00000603762 682 ntBASIC13.63□□□□□ -0.23
GAFA1Q96PS6 AL691403.2-201ENST00000618460 490 ntBASIC13.63□□□□□ -0.23
GAFA1Q96PS6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.63□□□□□ -0.23
GAFA1Q96PS6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 KRT18P32-201ENST00000424695 1287 ntBASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 CNN2P11-201ENST00000429351 262 ntBASIC13.62□□□□□ -0.23
GAFA1Q96PS6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AC093520.2-201ENST00000561830 333 ntBASIC13.62□□□□□ -0.23
GAFA1Q96PS6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AL596442.2-201ENST00000610240 980 ntBASIC13.62□□□□□ -0.23
GAFA1Q96PS6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AC084121.4-201ENST00000641598 221 ntBASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AF228730.8-201ENST00000642140 221 ntBASIC13.62□□□□□ -0.23
GAFA1Q96PS6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms