Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 AC022211.2-201ENST00000585075 2527 ntBASIC19.01■□□□□ 0.63
CCDC17Q96LX7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 FO393414.2-201ENST00000405153 598 ntBASIC19.01■□□□□ 0.63
CCDC17Q96LX7 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.01■□□□□ 0.63
CCDC17Q96LX7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 SDHAP3-202ENST00000515467 728 ntBASIC19.01■□□□□ 0.63
CCDC17Q96LX7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 SPDYE22P-201ENST00000582158 798 ntBASIC19.01■□□□□ 0.63
CCDC17Q96LX7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 AC027307.3-201ENST00000594262 1100 ntBASIC19.01■□□□□ 0.63
CCDC17Q96LX7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC17Q96LX7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC17Q96LX7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC17Q96LX7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC17Q96LX7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC17Q96LX7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC17Q96LX7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC17Q96LX7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC17Q96LX7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC17Q96LX7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC17Q96LX7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCDC17Q96LX7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19■□□□□ 0.63
CCDC17Q96LX7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19■□□□□ 0.63
CCDC17Q96LX7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
CCDC17Q96LX7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19■□□□□ 0.63
CCDC17Q96LX7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19■□□□□ 0.63
CCDC17Q96LX7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC17Q96LX7 AC114501.2-201ENST00000439631 535 ntBASIC19■□□□□ 0.63
CCDC17Q96LX7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19■□□□□ 0.63
CCDC17Q96LX7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19■□□□□ 0.63
CCDC17Q96LX7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC17Q96LX7 AC044860.1-202ENST00000559481 777 ntBASIC19■□□□□ 0.63
CCDC17Q96LX7 RNA5-8SN1-201ENST00000610460 153 ntBASIC19■□□□□ 0.63
CCDC17Q96LX7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19■□□□□ 0.63
CCDC17Q96LX7 RNA5-8SN5-202ENST00000612463 153 ntBASIC19■□□□□ 0.63
CCDC17Q96LX7 RNA5-8SN4-201ENST00000613359 153 ntBASIC19■□□□□ 0.63
CCDC17Q96LX7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCDC17Q96LX7 RNA5-8SN5-201ENST00000619471 153 ntBASIC19■□□□□ 0.63
CCDC17Q96LX7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC17Q96LX7 CYP4F24P-201ENST00000586049 1580 ntBASIC19■□□□□ 0.63
CCDC17Q96LX7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CCDC17Q96LX7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC17Q96LX7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC17Q96LX7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC17Q96LX7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19■□□□□ 0.63
CCDC17Q96LX7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19■□□□□ 0.63
CCDC17Q96LX7 AL136982.4-201ENST00000437689 1740 ntBASIC19■□□□□ 0.63
CCDC17Q96LX7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC17Q96LX7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC17Q96LX7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 ME2P1-201ENST00000426028 1970 ntBASIC18.99■□□□□ 0.63
CCDC17Q96LX7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms