Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 LINC00895-201ENST00000629028 1637 ntBASIC17.66■□□□□ 0.42
LRCH3Q96II8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 TMEM198B-204ENST00000484016 896 ntBASIC17.66■□□□□ 0.42
LRCH3Q96II8 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.66■□□□□ 0.42
LRCH3Q96II8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH3Q96II8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRCH3Q96II8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 MIR33B-201ENST00000385104 96 ntBASIC17.65■□□□□ 0.42
LRCH3Q96II8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 ACTG1P3-201ENST00000431775 1114 ntBASIC17.65■□□□□ 0.42
LRCH3Q96II8 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 AC104306.2-201ENST00000451877 341 ntBASIC17.65■□□□□ 0.42
LRCH3Q96II8 AKR7A2P1-201ENST00000460134 915 ntBASIC17.65■□□□□ 0.42
LRCH3Q96II8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 AC106820.2-201ENST00000563775 3264 ntBASIC17.65■□□□□ 0.42
LRCH3Q96II8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.65■□□□□ 0.42
LRCH3Q96II8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH3Q96II8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRCH3Q96II8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRCH3Q96II8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.64■□□□□ 0.42
LRCH3Q96II8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms